Detailed Information for Phage Catfish |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Lauren Nguyen |
Year Found | 2017 |
Location Found | Tyler, TX USA |
Finding Institution | University of Louisiana at Monroe |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 32.2529 N, 95.3152 W Map |
Discovery Notes | In a ball park's dirt parking lot. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 26, 2018 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 164 |
Genome length (bp) | 46888 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | AGTCCGCCGGT |
GC Content | 65.0% |
Sequencing Notes | Original sample was mixed with Dogfish, sample was purified using PCR to verify. |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CU |
Subcluster | CU5 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | University of Louisiana at Monroe |
Annotation Status | In GenBank |
Number of Genes | 78 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH697580 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
59 |
Pitt Freezer Box Grid# |
C4 |
Available Files |
Plaque Picture | Download |
GenBank File for Phamerator | Download |