Mycobacterium phage Cepens
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Detailed Information for Phage Cepens
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByEthan Strickland
Year Found2016
Location FoundDahlonega, GA USA
Finding InstitutionUniversity of North Georgia
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates34.527941 N, 83.987715 W Map
Discovery NotesCame from a garden behind Lewis Hall at the University of North Georgia, in Dahlonega, Georgia. Fluffy, slightly moist soil that was being used to grow tomatoes. Was a warm, humid day.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 12, 2018
Sequencing FacilityNC State Genomic Sciences Laboratory
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage2351
Genome length (bp)60656
Character of genome endsCircularly Permuted
GC Content67.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterW
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of North Georgia
Annotation StatusIn GenBank
Plaque Notes2mm clear round plaques
MorphotypeSiphoviridae
Number of Genes91
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Cepens_1
(helix-turn-helix DNA-binding protein)

Cepens_2
(terminase)

Cepens_3
(helix-turn-helix DNA-binding protein)

Cepens_4

Cepens_5

Cepens_6
(portal protein)

Cepens_7
(capsid maturation protease and MuF-like fusion protein)

Cepens_8

Cepens_9
(major capsid hexamer protein)

Cepens_10
(major capsid pentamer protein)

Cepens_11

Cepens_12

Cepens_13

Cepens_14

Cepens_15
(major tail protein)

Cepens_16
(head-to-tail adaptor)

Cepens_17

Cepens_18

Cepens_19
(tail assembly chaperone)

Cepens_20
(tail assembly chaperone)

Cepens_21
(tape measure protein)

Cepens_22
(minor tail protein)

Cepens_23
(minor tail protein)

Cepens_24
(minor tail protein)

Cepens_25

Cepens_26

Cepens_27

Cepens_28

Cepens_29

Cepens_30

Cepens_31

Cepens_32

Cepens_33

Cepens_34

Cepens_35

Cepens_36
(lysin A)

Cepens_37
(holin)

Cepens_38
(helix-turn-helix DNA-binding protein)

Cepens_39

Cepens_40

Cepens_41

Cepens_42

Cepens_43

Cepens_44

Cepens_45

Cepens_46

Cepens_47

Cepens_48

Cepens_49

Cepens_50

Cepens_51
(RecA-like DNA recombinase)

Cepens_52
(HNH endonuclease)

Cepens_53

Cepens_54

Cepens_55
(WhiB family transcription factor)

Cepens_56

Cepens_57

Cepens_58

Cepens_59

Cepens_60

Cepens_61

Cepens_62

Cepens_63

Cepens_64

Cepens_65

Cepens_66
(HNH endonuclease)

Cepens_67

Cepens_68

Cepens_69

Cepens_70

Cepens_71 — tRNA

Cepens_72

Cepens_73
(ParB-like nuclease domain protein)

Cepens_74

Cepens_75

Cepens_76

Cepens_77

Cepens_78

Cepens_79

Cepens_80

Cepens_81

Cepens_82

Cepens_83

Cepens_84

Cepens_85

Cepens_86

Cepens_87

Cepens_88

Cepens_89

Cepens_90

Cepens_91

Cepens_92

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK494132
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 5x10^9
Pitt Freezer Box# 31
Pitt Freezer Box Grid# E2
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload