Gordonia phage Coeur
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| Detailed Information for Phage Coeur | |
| Discovery Information | |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Lalit Molleti |
| Year Found | 2016 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 19°C |
| GPS Coordinates | 40.44479 N, 79.960463 W Map |
| Discovery Notes | Taken from flower bed at 8:15 in morning on September 19th. Taken few inches from surface and was moist and easy to pick up. It had rained the previous night. |
| Naming Notes | Coeur which is a French word means heart in english. I felt that it would be a fitting name for a phage since any discovery requires for passion to be behind it. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 15, 2016 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 5134 |
| Genome length (bp) | 16223 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 6 bases |
| Overhang Sequence | ACCCCT |
| GC Content | 58.0% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | CW |
| Subcluster | CW2 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members | |
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | Creates round, cloudy plaques with large and small morphologies. Large plaques wer approximately 1 mm to 2.5 mm while the small plaques were approximately .2mm to .5 mm. |
| Number of Genes | 26 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewCoeur_1 Coeur_2 Coeur_3 Coeur_4 Coeur_5 Coeur_6 Coeur_7 Coeur_8 Coeur_9 Coeur_10 Coeur_11 Coeur_12 Coeur_13 Coeur_14 Coeur_15 Coeur_16 Coeur_17 Coeur_18 Coeur_19 Coeur_20 Coeur_21 Coeur_22 Coeur_23 Coeur_24 Coeur_25 Coeur_26 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MK801723 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 42 |
| Pitt Freezer Box Grid# | C7 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| GenBank File for Phamerator | Download |
