Microbacterium phage DesireeRose
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Detailed Information for Phage DesireeRose
Discovery Information
Isolation HostMicrobacterium testaceum NRRL B-24232
Found ByDesiree Vargas
Year Found2019
Location FoundNyack, NY United States of America
Finding InstitutionNyack College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates41.087873 N, 73.93196 W Map
Naming NotesI decided to name my phage DesireeRose after me (Desiree) because I wanted to be able to look back and know that I was able to find a phage that could possibly help someone one day.In addition, I also love roses.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 19, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage4572
Genome length (bp)15488
Character of genome endsCovalent Terminal Protein
End Determination NotesThis phage shows similarity to other Tectiviridae, which generally have covalently-bound terminal proteins. In addition, the sequencing reads end at a specific base without any circularizing reads, and the genome has ~112 bp inverted terminal repeats. Taken together, these lines of evidence point to this phage likely having covalently-bound terminal proteins.
GC Content55.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterGE
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionNyack College
Annotation StatusIn GenBank
Has been Phamerated?Yes
Gene List
Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOL455892
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 97
Pitt Freezer Box Grid# B7
Available Files
EM PictureDownload
GenBank File for PhameratorDownload