Microbacterium phage MuffinTheCat
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Detailed Information for Phage MuffinTheCat
Discovery Information
Isolation HostMicrobacterium testaceum NRRL B-24232
Former namesJeffrey
Found ByDarcy Reimer
Year Found2019
Location FoundNyack, NY United States of America
Finding InstitutionAlliance University (formerly Nyack College)
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature28°C
GPS Coordinates41.088212 N, 73.930983 W Map
Discovery NotesFound in a mostly dried up stream, in a more damp area
Naming NotesJeffrey is a good name for a phage, picked randomly.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 12, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage824
Genome length (bp)15494
Character of genome endsCovalent Terminal Protein
End Determination NotesThis phage shows similarity to other Tectiviridae, which generally have covalently-bound terminal proteins. In addition, the sequencing reads end at a specific base without any circularizing reads, and the genome has ~113 bp inverted terminal repeats. Taken together, these lines of evidence point to this phage likely having covalently-bound terminal proteins.
GC Content55.1%
Fasta file available?Yes: Download fasta file
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionAlliance University (formerly Nyack College)
Annotation StatusIn GenBank
Has been Phamerated?Yes
Gene List
Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT952848
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 97
Pitt Freezer Box Grid# B10
Available Files
EM PictureDownload
GenBank File for PhameratorDownload