Microbacterium phage DizzyRudy
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage DizzyRudy
Discovery Information
Isolation HostMicrobacterium paraoxydans NRRL B-14843
Found ByJacqueline Washington
Year Found2018
Location FoundBEDFORD, NY USA
Finding InstitutionAlliance University (formerly Nyack College)
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature28°C
GPS Coordinates41.191823 N, 73.607616 W Map
Discovery NotesFound in the same soil sample as TasheeJ next to a pond where the goose lived.
Naming NotesNamed after a white goose who was a character and thought he was part human. Some called him Dizzy - he was a little crazy and others called him Rudy - hence DizzyRudy.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 11, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage833
Genome length (bp)55815
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCGTCACT
GC Content56.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEL
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionAlliance University (formerly Nyack College)
Annotation StatusIn GenBank
Number of Genes86
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

DizzyRudy_1

DizzyRudy_2
(endolysin)

DizzyRudy_3

DizzyRudy_4

DizzyRudy_5

DizzyRudy_6

DizzyRudy_7
(HNH endonuclease)

DizzyRudy_8

DizzyRudy_9

DizzyRudy_10
(terminase)

DizzyRudy_11

DizzyRudy_12
(portal protein)

DizzyRudy_13

DizzyRudy_14
(major capsid and protease fusion protein)

DizzyRudy_15

DizzyRudy_16
(tail terminator)

DizzyRudy_17
(major tail protein)

DizzyRudy_18

DizzyRudy_19
(major tail protein)

DizzyRudy_20
(major tail protein)

DizzyRudy_21

DizzyRudy_22

DizzyRudy_23

DizzyRudy_24
(tape measure protein)

DizzyRudy_25
(minor tail protein)

DizzyRudy_26
(minor tail protein)

DizzyRudy_27

DizzyRudy_28
(minor tail protein)

DizzyRudy_29

DizzyRudy_30

DizzyRudy_31

DizzyRudy_32

DizzyRudy_33

DizzyRudy_34

DizzyRudy_35
(acetyltransferase)

DizzyRudy_36

DizzyRudy_37

DizzyRudy_38

DizzyRudy_39

DizzyRudy_40

DizzyRudy_41

DizzyRudy_42

DizzyRudy_43

DizzyRudy_44

DizzyRudy_45

DizzyRudy_46

DizzyRudy_47

DizzyRudy_48

DizzyRudy_49

DizzyRudy_50

DizzyRudy_51

DizzyRudy_52

DizzyRudy_53
(DNA primase/polymerase)

DizzyRudy_54

DizzyRudy_55

DizzyRudy_56

DizzyRudy_57

DizzyRudy_58

DizzyRudy_59

DizzyRudy_60

DizzyRudy_61

DizzyRudy_62
(HNH endonuclease)

DizzyRudy_63
(HNH endonuclease)

DizzyRudy_64

DizzyRudy_65
(DNA helicase)

DizzyRudy_66

DizzyRudy_67
(MazG-like nucleotide pyrophosphohydrolase)

DizzyRudy_68

DizzyRudy_69

DizzyRudy_70

DizzyRudy_71
(ThyX-like thymidylate synthase)

DizzyRudy_72

DizzyRudy_73

DizzyRudy_74

DizzyRudy_75

DizzyRudy_76

DizzyRudy_77

DizzyRudy_78

DizzyRudy_79

DizzyRudy_80

DizzyRudy_81

DizzyRudy_82

DizzyRudy_83
(VRR-Nuc domain protein)

DizzyRudy_84
(Cas4 family exonuclease)

DizzyRudy_85
(helix-turn-helix DNA-binding domain protein)

DizzyRudy_86

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK814756
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 93
Pitt Freezer Box Grid# F1
Available Files
GenBank File for PhameratorDownload