| Detailed Information for Phage Dodo |
| Discovery Information |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Clara Bader |
| Year Found | 2024 |
| Location Found | Marshall, MN United States |
| Finding Institution | Northwestern College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 78°C |
| GPS Coordinates | 44.39633 N, 95.81794 W Map |
| Discovery Notes | 1 titer: 2x10^12 (10/1/24)
2 titer: 2x10^10 (10/29/24) |
| Naming Notes | I wanted the name to be bird related since I got the dirt from the hill we put out poultry litter on to decompose. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 30, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 100 bp |
| Approximate Shotgun Coverage | 430 |
| Genome length (bp) | 193576 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 15376 bp |
| GC Content | 60.0% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | GD |
| Subcluster | GD1 |
| Cluster Life Cycle | Unknown |
| Other Cluster Members |
|
| Annotating Institution | Northwestern College |
| Annotation Status | Being Annotated (Expected completion by 12/15/2025) |
| Morphotype | Siphoviridae |
| Number of Genes | 345 |
| Number of tRNAs | 47 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Publication Info |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Not in Pitt Archives |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
