Microbacterium phage Pumpernickel
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Detailed Information for Phage Pumpernickel
Discovery Information
Isolation HostMicrobacterium paraoxydans NRRL B-14843
Found ByEthan Heelein
Year Found2019
Location FoundRiver Falls, WI United States
Finding InstitutionUniversity of Wisconsin-River Falls
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature28°C
GPS Coordinates44.851389 N, 92.615556 W Map
Discovery NotesThe soil sample was collected from marshy soil near the Ames Suits Dorms on the University of Wisconsin River Falls Campus
Naming NotesWas looking for a fun name that started with a P.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 24, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage358
Genome length (bp)186095
Character of genome endsCovalent Terminal Protein
Direct Terminal Repeat Length19963 bp
GC Content56.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterUnclustered
Subcluster--
Annotating InstitutionUniversity of Wisconsin-River Falls
Annotation StatusBeing Annotated (Expected completion by 5/1/2020)
Plaque NotesThe Overall morphology were consistently small in size, places were perfectly clear.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload