Streptomyces phage Dryad
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Dryad
Discovery Information
Isolation HostStreptomyces viridochromogenes DSM40736
Found ByMarta Taye and Iris Chin
Year Found2015
Location FoundEureka, MO USA
Finding InstitutionWashington University in St. Louis
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature27°C
GPS Coordinates38.51817 N, 90.556374 W Map
Discovery NotesOur soil was collected from the forest surrounding the Washington University Tyson Research Center on 8/29/15. The collection site was on southward-facing hill, far from any roads or other human structures. The soil was collected at a depth of 4cm after the leaf litter which rested on top of it was cleared away. The weather at time of collection (1:30PM) was partly cloudy.
Naming NotesFrom Greek Mythology: a dryad is a nymph of the forest.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedSep 18, 2019
Sequencing FacilityThe McDonnell Genome Institute at Washington University
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage130
Genome length (bp)68994
Character of genome endsCircularly Permuted
GC Content63.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBN
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionWashington University in St. Louis
Annotation StatusIn GenBank
Plaque NotesDespite having done 5 rounds of purification, the plaques vary greatly in size (from barely visible to about 2mm in diameter). They are circular and fully clear.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Dryad_1

Dryad_2

Dryad_3

Dryad_4

Dryad_5

Dryad_6

Dryad_7

Dryad_8

Dryad_9
(terminase)

Dryad_10
(portal protein)

Dryad_11

Dryad_12

Dryad_13

Dryad_14
(minor capsid protein)

Dryad_15
(scaffolding protein)

Dryad_16
(major capsid protein)

Dryad_17
(head-to-tail adaptor)

Dryad_18
(head-to-tail stopper)

Dryad_19

Dryad_20

Dryad_21
(tail terminator)

Dryad_22
(major tail protein)

Dryad_23
(tail assembly chaperone)

Dryad_24
(tail assembly chaperone)

Dryad_25
(tape measure protein)

Dryad_26
(minor tail protein)

Dryad_27
(minor tail protein)

Dryad_28
(minor tail protein)

Dryad_29

Dryad_30

Dryad_31
(endolysin)

Dryad_32

Dryad_33

Dryad_34
(glycosyltransferase)

Dryad_35

Dryad_36
(methyltransferase)

Dryad_37

Dryad_38

Dryad_39
(DNA helicase)

Dryad_40
(RuvC-like resolvase)

Dryad_41

Dryad_42

Dryad_43

Dryad_44

Dryad_45

Dryad_46

Dryad_47

Dryad_48

Dryad_49

Dryad_50

Dryad_51
(ThyX-like thymidylate synthase)

Dryad_52

Dryad_53

Dryad_54

Dryad_55

Dryad_56
(DnaE-like DNA polymerase III (alpha))

Dryad_57

Dryad_58

Dryad_59
(phosphatase)

Dryad_60

Dryad_61

Dryad_62

Dryad_63

Dryad_64

Dryad_65

Dryad_66

Dryad_67

Dryad_68
(RecA-like DNA Recombinase)

Dryad_69

Dryad_70
(Cas4 family exonuclease)

Dryad_71

Dryad_72

Dryad_73

Dryad_74
(helicase)

Dryad_75
(deoxycytidylate deaminase)

Dryad_76

Dryad_77

Dryad_78

Dryad_79

Dryad_80

Dryad_81

Dryad_82

Dryad_83

Dryad_84

Dryad_85

Dryad_86

Dryad_87

Dryad_88

Dryad_89

Dryad_90

Dryad_91

Dryad_92

Dryad_93

Dryad_94

Dryad_95
(metalloprotease)

Dryad_96

Dryad_97

Dryad_98

Dryad_99

Dryad_100

Dryad_101

Dryad_102

Dryad_103

Dryad_104

Dryad_105

Dryad_106

Dryad_107

Dryad_108
(DNA primase/helicase)

Dryad_109

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT498037
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
SEA Lysate Titer 1.98 x 10^8 pfu/mL
Date of SEA Lysate Titering Oct 13, 2015
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload