Detailed Information for Phage GUPitcher | |
Discovery Information | |
Isolation Host | Arthrobacter globiformis B-2979 |
Found By | Brendan Bowyer, Finbar O'Brien |
Year Found | 2024 |
Location Found | Spokane, WA United States |
Finding Institution | Gonzaga University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 22°C |
GPS Coordinates | 47.66833 N, 117.40302 W Map |
Discovery Notes | College Hall at Gonzaga University. We took soil from right outside to the right of the main entrance. Soil was dark and healthy |
Naming Notes | We like baseball |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 13, 2025 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 5210 |
Genome length (bp) | 46779 |
Character of genome ends | Circularly Permuted |
GC Content | 64.7% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | FJ |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members | |
Annotating Institution | Gonzaga University |
Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
Plaque Notes | 1mm-3mm size Clear Plaques with no halos Circular |
Morphotype | Siphoviridae |
Number of Genes | 82 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
Click to ViewGUPitcher_1 GUPitcher_2 GUPitcher_3 GUPitcher_4 GUPitcher_5 GUPitcher_6 GUPitcher_7 GUPitcher_8 GUPitcher_9 GUPitcher_10 GUPitcher_11 GUPitcher_12 GUPitcher_13 GUPitcher_14 GUPitcher_15 GUPitcher_16 GUPitcher_17 GUPitcher_18 GUPitcher_19 GUPitcher_20 GUPitcher_21 GUPitcher_22 GUPitcher_23 GUPitcher_24 GUPitcher_25 GUPitcher_26 GUPitcher_27 GUPitcher_28 GUPitcher_29 GUPitcher_30 GUPitcher_31 GUPitcher_32 GUPitcher_33 GUPitcher_34 GUPitcher_35 GUPitcher_36 GUPitcher_37 GUPitcher_38 GUPitcher_39 GUPitcher_40 GUPitcher_41 GUPitcher_42 GUPitcher_43 GUPitcher_44 GUPitcher_45 GUPitcher_46 GUPitcher_47 GUPitcher_48 GUPitcher_49 GUPitcher_50 GUPitcher_51 GUPitcher_52 GUPitcher_53 GUPitcher_54 GUPitcher_55 GUPitcher_56 GUPitcher_57 GUPitcher_58 GUPitcher_59 GUPitcher_60 GUPitcher_61 GUPitcher_62 GUPitcher_63 GUPitcher_64 GUPitcher_65 GUPitcher_66 GUPitcher_67 GUPitcher_68 GUPitcher_69 GUPitcher_70 GUPitcher_71 GUPitcher_72 GUPitcher_73 GUPitcher_74 GUPitcher_75 GUPitcher_76 GUPitcher_77 GUPitcher_78 GUPitcher_79 GUPitcher_80 GUPitcher_81 GUPitcher_82 — tRNA GUPitcher_83 |
Publication Info | |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Not in Pitt Archives |
Available Files | |
Plaque Picture | Download |
Restriction Digest Picture | Download |
Virtual Digest Picture | Download |
EM Picture | Download |