Streptomyces phage Garnacho
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Detailed Information for Phage Garnacho
Discovery Information
Isolation HostStreptomyces lividans JI 1326
Found ByJack Farah
Year Found2024
Location FoundSt. Louis, MO United States of America
Finding InstitutionWashington University in St. Louis
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation Temperature27°C
GPS Coordinates38.648547 N, 90.312417 W Map
Naming NotesAlejandro Garnacho, Player for Manchester United
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 17, 2025
Sequencing FacilityThe McDonnell Genome Institute at Washington University
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina MiSeq
Read TypeSingle-end reads
Read Length150 bp
Approximate Shotgun Coverage131
Genome length (bp)114833
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length315 bp
GC Content52.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBS
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionWashington University in St. Louis
Annotation StatusQC Complete
Plaque NotesCircular, rough-edged plaques
Number of Genes183
Number of tRNAs29
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Garnacho_1

Garnacho_2
(HNH endonuclease)

Garnacho_3

Garnacho_4

Garnacho_5

Garnacho_6

Garnacho_7
(ribbon-helix-helix DNA binding domain)

Garnacho_8

Garnacho_9

Garnacho_10

Garnacho_11

Garnacho_12 — tRNA
(tRNA-Pro(tgg))

Garnacho_13 — tRNA
(tRNA-Phe(gaa))

Garnacho_14 — tRNA
(tRNA-Met(cat))

Garnacho_15 — tRNA
(tRNA-Met(cat))

Garnacho_16 — tRNA
(tRNA-Gly(tcc))

Garnacho_17 — tRNA
(tRNA-Gln(ctg))

Garnacho_18 — tRNA
(tRNA-Gln(ttg))

Garnacho_19 — tRNA
(tRNA-Asp(gtc))

Garnacho_20 — tRNA
(tRNA-Glu(ctc))

Garnacho_21 — tRNA
(tRNA-Glu(ttc))

Garnacho_22

Garnacho_23 — tRNA
(tRNA-Thr(tgt))

Garnacho_24 — tRNA
(tRNA-Thr(cgt))

Garnacho_25 — tRNA
(tRNA-Thr(ggt))

Garnacho_26 — tRNA
(tRNA-Leu(caa))

Garnacho_27 — tRNA
(tRNA-Leu(tag))

Garnacho_28

Garnacho_29 — tRNA
(tRNA-Asn(gtt))

Garnacho_30 — tRNA
(tRNA-Ser(gct))

Garnacho_31
(Ro-like RNA binding protein)

Garnacho_32 — tRNA
(tRNA-Ala(tgc))

Garnacho_33 — tRNA
(tRNA-Lys(ctt))

Garnacho_34 — tRNA
(tRNA-Lys(ttt))

Garnacho_35

Garnacho_36
(peptidase)

Garnacho_37

Garnacho_38

Garnacho_39 — tRNA
(tRNA-Arg(acg))

Garnacho_40

Garnacho_41

Garnacho_42 — tRNA
(tRNA-Arg(tct))

Garnacho_43

Garnacho_44

Garnacho_45 — tRNA
(tRNA-Val(tac))

Garnacho_46

Garnacho_47 — tRNA
(tRNA-Ser(gct))

Garnacho_48 — tRNA
(tRNA-Ser(gga))

Garnacho_49 — tRNA
(tRNA-Ser(tga))

Garnacho_50 — tRNA
(tRNA-Ile(gat))

Garnacho_51
(thioredoxin)

Garnacho_52 — tRNA
(tRNA-His(gtg))

Garnacho_53

Garnacho_54 — tRNA
(tRNA-Tyr(gta))

Garnacho_55
(RNA ligase)

Garnacho_56

Garnacho_57
(phosphoesterase)

Garnacho_58
(MazG-like nucleotide pyrophosphohydrolase)

Garnacho_59

Garnacho_60

Garnacho_61

Garnacho_62

Garnacho_63
(terminase)

Garnacho_64

Garnacho_65
(cyclic nucleotide sequestering protein)

Garnacho_66

Garnacho_67

Garnacho_68

Garnacho_69

Garnacho_70

Garnacho_71
(portal protein)

Garnacho_72
(scaffolding protein)

Garnacho_73
(major capsid protein)

Garnacho_74

Garnacho_75
(minor tail protein)

Garnacho_76

Garnacho_77

Garnacho_78
(tailspike protein)

Garnacho_79

Garnacho_80

Garnacho_81
(tail terminator)

Garnacho_82
(tail sheath protein)

Garnacho_83
(tail tube protein)

Garnacho_84

Garnacho_85

Garnacho_86

Garnacho_87
(minor tail protein)

Garnacho_88

Garnacho_89
(minor tail protein)

Garnacho_90
(minor tail protein)

Garnacho_91
(baseplate wedge protein)

Garnacho_92
(baseplate J protein)

Garnacho_93

Garnacho_94
(minor tail protein)

Garnacho_95
(minor tail protein)

Garnacho_96

Garnacho_97

Garnacho_98

Garnacho_99

Garnacho_100

Garnacho_101

Garnacho_102

Garnacho_103
(DnaC-like helicase loader)

Garnacho_104

Garnacho_105

Garnacho_106

Garnacho_107
(nucleotidyl transferase)

Garnacho_108

Garnacho_109
(polynucleotide kinase)

Garnacho_110

Garnacho_111

Garnacho_112

Garnacho_113

Garnacho_114

Garnacho_115
(DnaB-like dsDNA helicase)

Garnacho_116
(DNA primase)

Garnacho_117
(DNA helicase)

Garnacho_118
(host nuclease inhibitor)

Garnacho_119

Garnacho_120

Garnacho_121

Garnacho_122

Garnacho_123

Garnacho_124

Garnacho_125

Garnacho_126

Garnacho_127

Garnacho_128

Garnacho_129

Garnacho_130
(helix-turn-helix DNA binding domain)

Garnacho_131

Garnacho_132
(SSB protein)

Garnacho_133
(DNA polymerase I)

Garnacho_134

Garnacho_135

Garnacho_136
(ribonucleotide reductase)

Garnacho_137

Garnacho_138

Garnacho_139
(RecA-like DNA recombinase)

Garnacho_140
(minor tail protein)

Garnacho_141

Garnacho_142
(RNA ligase)

Garnacho_143

Garnacho_144

Garnacho_145

Garnacho_146

Garnacho_147

Garnacho_148

Garnacho_149

Garnacho_150

Garnacho_151
(Holliday junction resolvase)

Garnacho_152
(WhiB family transcription factor)

Garnacho_153
(Cas4 exonuclease)

Garnacho_154
(SSB protein)

Garnacho_155

Garnacho_156
(ThyX-like thymidylate synthase)

Garnacho_157

Garnacho_158

Garnacho_159

Garnacho_160

Garnacho_161
(DprA-like DNA processing chain A)

Garnacho_162

Garnacho_163

Garnacho_164

Garnacho_165
(RuvC-like resolvase)

Garnacho_166
(DNA binding protein)

Garnacho_167

Garnacho_168

Garnacho_169

Garnacho_170

Garnacho_171

Garnacho_172

Garnacho_173
(peptidase)

Garnacho_174

Garnacho_175

Garnacho_176

Garnacho_177
(endolysin)

Garnacho_178

Garnacho_179
(phosphatase)

Garnacho_180

Garnacho_181

Garnacho_182

Garnacho_183

Garnacho_184

Garnacho_185

Garnacho_186

Garnacho_187

Garnacho_188

Garnacho_189

Garnacho_190
(antirestriction protein, ArdA-like)

Garnacho_191

Garnacho_192

Garnacho_193

Garnacho_194

Garnacho_195

Garnacho_196

Garnacho_197

Garnacho_198

Garnacho_199

Garnacho_200

Garnacho_201

Garnacho_202

Garnacho_203

Garnacho_204

Garnacho_205

Garnacho_206

Garnacho_207

Garnacho_208

Garnacho_209

Garnacho_210

Garnacho_211

Garnacho_212

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload