Detailed Information for Phage GiJojo |
Discovery Information |
Isolation Host | Streptomyces mirabilis NRRL B-2400 |
Former names | Sheryl |
Found By | Driwech,Oumaima & Fritz,Lily |
Year Found | 2023 |
Location Found | Catonsville, MD USA |
Finding Institution | University of Maryland, Baltimore County |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 39.25536 N, 76.711944 W Map |
Discovery Notes | Soil was collected on 10/24/2023 outside of the UMBC Biology building exit door. The ambient temperature was 18.3 C. Soil was dug around 3-4 inches below the surface. The soil was collected by Abdullah Bajwah and Zain Naeem |
Naming Notes | We chose the name GiJojo because we had to have a lot of time and patience to get his phage and it was very resilient. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 19, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 235 |
Genome length (bp) | 115161 |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 197 bp |
GC Content | 53.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | BS |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Lysogeny Notes | Lysogeny testing was not performed. |
Other Cluster Members |
|
Annotating Institution | University of Maryland, Baltimore County |
Annotation Status | In GenBank |
Plaque Notes | Clear, circular, smooth edges, symmetrical |
Morphotype | Myoviridae |
Number of Genes | 180 |
Number of tRNAs | 29 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PP725410 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
171 |
Pitt Freezer Box Grid# |
C1 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |