| Detailed Information for Phage GlobiWarming | |
| Discovery Information | |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Former names | amogus |
| Found By | Joseph Kim |
| Year Found | 2021 |
| Location Found | Los Angeles, CA United States |
| Finding Institution | University of Southern California |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 34.021115 N, 118.287386 W Map |
| Discovery Notes | The soil was in shade, contains moss, and was damp and moist at the time of collection. It was taken near the Track and Field stadium at USC at 12:23 PM. There were lots of trees and vegetation around; specifically moss. |
| Naming Notes | The name of this phage, GlobiWarming, is based on the activity of the bacteriophage as well as the bacteria the phage was grown upon. GlobiWarming is a bacteriophage that preys on Arthrobacter globiformis bacteria; this is similar to the current global warming crisis in which many species are going extinct as a result of the irregular global warming as part of the sixth mass extinction event. I hope to continue to spread awareness to the effects of global warming with GlobiWarming. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 22, 2021 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 2004 |
| Genome length (bp) | 42961 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CGCCGGAGA |
| GC Content | 65.0% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | FA |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Other Cluster Members | |
| Annotating Institution | University of Southern California |
| Annotation Status | In GenBank |
| Plaque Notes | Numerous, small plaques. Clear, defined plaques. |
| Morphotype | Siphoviridae |
| Number of Genes | 74 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewGlobiWarming_1 GlobiWarming_2 GlobiWarming_3 GlobiWarming_4 GlobiWarming_5 GlobiWarming_6 GlobiWarming_7 GlobiWarming_8 GlobiWarming_9 GlobiWarming_10 GlobiWarming_11 GlobiWarming_12 GlobiWarming_13 GlobiWarming_14 GlobiWarming_15 GlobiWarming_16 GlobiWarming_17 GlobiWarming_18 GlobiWarming_19 GlobiWarming_20 GlobiWarming_21 GlobiWarming_22 GlobiWarming_23 GlobiWarming_24 GlobiWarming_25 GlobiWarming_26 GlobiWarming_27 GlobiWarming_28 GlobiWarming_29 GlobiWarming_30 GlobiWarming_31 GlobiWarming_32 GlobiWarming_33 GlobiWarming_34 GlobiWarming_35 GlobiWarming_36 GlobiWarming_37 GlobiWarming_38 GlobiWarming_39 GlobiWarming_40 GlobiWarming_41 GlobiWarming_42 GlobiWarming_43 GlobiWarming_44 GlobiWarming_45 GlobiWarming_46 GlobiWarming_47 GlobiWarming_48 GlobiWarming_49 GlobiWarming_50 GlobiWarming_51 GlobiWarming_52 GlobiWarming_53 GlobiWarming_54 GlobiWarming_55 GlobiWarming_56 GlobiWarming_57 GlobiWarming_58 GlobiWarming_59 GlobiWarming_60 GlobiWarming_61 GlobiWarming_62 GlobiWarming_63 GlobiWarming_64 GlobiWarming_65 GlobiWarming_66 GlobiWarming_67 GlobiWarming_68 GlobiWarming_69 GlobiWarming_70 GlobiWarming_71 GlobiWarming_72 GlobiWarming_73 GlobiWarming_74 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | ON970561 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 1.2 x 10^11 pfu/mL |
| Pitt Freezer Box# | 134 |
| Pitt Freezer Box Grid# | E5 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
