Arthrobacter phage GlobiWarming
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Detailed Information for Phage GlobiWarming
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Former namesamogus
Found ByJoseph Kim
Year Found2021
Location FoundLos Angeles, CA United States
Finding InstitutionUniversity of Southern California
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates34.021115 N, 118.287386 W Map
Discovery NotesThe soil was in shade, contains moss, and was damp and moist at the time of collection. It was taken near the Track and Field stadium at USC at 12:23 PM. There were lots of trees and vegetation around; specifically moss.
Naming NotesThe name of this phage, GlobiWarming, is based on the activity of the bacteriophage as well as the bacteria the phage was grown upon. GlobiWarming is a bacteriophage that preys on Arthrobacter globiformis bacteria; this is similar to the current global warming crisis in which many species are going extinct as a result of the irregular global warming as part of the sixth mass extinction event. I hope to continue to spread awareness to the effects of global warming with GlobiWarming.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 22, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2004
Genome length (bp)42961
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCCGGAGA
GC Content65.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterFA
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Southern California
Annotation StatusIn GenBank
Plaque NotesNumerous, small plaques. Clear, defined plaques.
MorphotypeSiphoviridae
Number of Genes74
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

GlobiWarming_1
(terminase small subunit)

GlobiWarming_2
(terminase large subunit)

GlobiWarming_3
(portal protein)

GlobiWarming_4

GlobiWarming_5
(scaffolding protein)

GlobiWarming_6
(major capsid protein)

GlobiWarming_7

GlobiWarming_8

GlobiWarming_9
(head-to-tail adaptor)

GlobiWarming_10
(head-to-tail stopper)

GlobiWarming_11

GlobiWarming_12
(tail terminator)

GlobiWarming_13

GlobiWarming_14
(major tail protein)

GlobiWarming_15
(tail assembly chaperone)

GlobiWarming_16
(tail assembly chaperone)

GlobiWarming_17

GlobiWarming_18
(tape measure protein)

GlobiWarming_19
(minor tail protein)

GlobiWarming_20
(minor tail protein)

GlobiWarming_21
(minor tail protein)

GlobiWarming_22
(minor tail protein)

GlobiWarming_23

GlobiWarming_24

GlobiWarming_25

GlobiWarming_26
(endolysin)

GlobiWarming_27

GlobiWarming_28

GlobiWarming_29

GlobiWarming_30

GlobiWarming_31
(esterase)

GlobiWarming_32

GlobiWarming_33
(lipase)

GlobiWarming_34

GlobiWarming_35
(tyrosine integrase)

GlobiWarming_36

GlobiWarming_37

GlobiWarming_38
(tyrosine integrase)

GlobiWarming_39
(helix-turn-helix DNA binding domain protein)

GlobiWarming_40
(immunity repressor)

GlobiWarming_41
(helix-turn-helix DNA binding domain protein)

GlobiWarming_42
(excise)

GlobiWarming_43

GlobiWarming_44

GlobiWarming_45

GlobiWarming_46

GlobiWarming_47

GlobiWarming_48
(Cas4 family exonuclease)

GlobiWarming_49
(ssDNA binding protein)

GlobiWarming_50

GlobiWarming_51

GlobiWarming_52

GlobiWarming_53

GlobiWarming_54

GlobiWarming_55

GlobiWarming_56

GlobiWarming_57

GlobiWarming_58

GlobiWarming_59

GlobiWarming_60

GlobiWarming_61

GlobiWarming_62

GlobiWarming_63
(DNA primase/helicase)

GlobiWarming_64

GlobiWarming_65

GlobiWarming_66

GlobiWarming_67
(holliday junction resolvase)

GlobiWarming_68

GlobiWarming_69

GlobiWarming_70

GlobiWarming_71

GlobiWarming_72

GlobiWarming_73

GlobiWarming_74
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionON970561
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.2 x 10^11 pfu/mL
Pitt Freezer Box# 134
Pitt Freezer Box Grid# E5
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload