Detailed Information for Phage Pucara | |
Discovery Information | |
Isolation Host | Arthrobacter globiformis B-2979 |
Found By | Trinidad Rodriguez Ricchiuti |
Year Found | 2023 |
Location Found | New Haven, CT United States |
Finding Institution | Southern Connecticut State University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 41.33287 N, 72.94537 W Map |
Discovery Notes | Next to pond Hot and sunny weather 28 degrees Celsius Undisturbed soil No trees around (direct exposure to sun) Insects in soil. Soil depth 6 cm Long flexible tail: length: 157.9 nm Spherical capsid: length and width: 57.98 nm |
Naming Notes | PUCARA:Field hockey club from my home town in Buenos Aires, Argentina |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 7, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 13306 |
Genome length (bp) | 42638 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCGGAGA |
GC Content | 65.4% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | FA |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
Click to View |
Annotating Institution | Southern Connecticut State University |
Annotation Status | Being Annotated (Expected completion by 5/1/2024) |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
Click to ViewPucara_Draft_1 Pucara_Draft_2 Pucara_Draft_3 Pucara_Draft_4 Pucara_Draft_5 Pucara_Draft_6 Pucara_Draft_7 Pucara_Draft_8 Pucara_Draft_9 Pucara_Draft_10 Pucara_Draft_11 Pucara_Draft_12 Pucara_Draft_13 Pucara_Draft_14 Pucara_Draft_15 Pucara_Draft_16 Pucara_Draft_17 Pucara_Draft_18 Pucara_Draft_19 Pucara_Draft_20 Pucara_Draft_21 Pucara_Draft_22 Pucara_Draft_23 Pucara_Draft_24 Pucara_Draft_25 Pucara_Draft_26 Pucara_Draft_27 Pucara_Draft_28 Pucara_Draft_29 Pucara_Draft_30 Pucara_Draft_31 Pucara_Draft_32 Pucara_Draft_33 Pucara_Draft_34 Pucara_Draft_35 Pucara_Draft_36 Pucara_Draft_37 Pucara_Draft_38 Pucara_Draft_39 Pucara_Draft_40 Pucara_Draft_41 Pucara_Draft_42 Pucara_Draft_43 Pucara_Draft_44 Pucara_Draft_45 Pucara_Draft_46 Pucara_Draft_47 Pucara_Draft_48 Pucara_Draft_49 Pucara_Draft_50 Pucara_Draft_51 Pucara_Draft_52 Pucara_Draft_53 Pucara_Draft_54 Pucara_Draft_55 Pucara_Draft_56 Pucara_Draft_57 Pucara_Draft_58 Pucara_Draft_59 Pucara_Draft_60 Pucara_Draft_61 Pucara_Draft_62 Pucara_Draft_63 |
Publication Info | |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Not in Pitt Archives |
SEA Lysate Titer | 7.2e10 pfu/mL |
Available Files | |
Plaque Picture | Download |
EM Picture | Download |