| Detailed Information for Phage JackieB | |
| Discovery Information | |
| Isolation Host | Streptomyces griseus ATCC 10137 |
| Found By | Richard Hale |
| Year Found | 2012 |
| Location Found | Fort Worth, TX USA |
| Finding Institution | University of North Texas |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 32.862146 N, 97.295193 W Map |
| Discovery Notes | Soil collected from a compost pile in my backyard. Compost consisted of leaves, trimmings, and vegetable matter that had been turned with soil. Pile about 1 year old. Dark and fragrant. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Apr 15, 2014 |
| Sequencing Facility | University of North Texas |
| Shotgun Sequencing Method | Ion Torrent Sequencing |
| Approximate Shotgun Coverage | 386 |
| Genome length (bp) | 54912 |
| Character of genome ends | Circularly Permuted |
| End Determination Notes | No buildups of reads were observed in the Ion Torrent data. The terminase is similar to that of Actinoplanes phage phiAsp2, which is reported to be circularly permuted. |
| GC Content | 68.2% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | BH |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | University of North Texas |
| Annotation Status | In GenBank |
| Morphotype | Siphoviridae |
| Number of Genes | 82 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewJackieB_1 JackieB_2 JackieB_3 JackieB_4 JackieB_5 JackieB_6 JackieB_7 JackieB_8 JackieB_9 JackieB_10 JackieB_11 JackieB_12 JackieB_13 JackieB_14 JackieB_15 JackieB_16 JackieB_17 JackieB_18 JackieB_19 JackieB_20 JackieB_21 JackieB_22 JackieB_23 JackieB_24 JackieB_25 JackieB_26 JackieB_27 JackieB_28 JackieB_29 JackieB_30 JackieB_31 JackieB_32 JackieB_33 JackieB_34 JackieB_35 JackieB_36 JackieB_37 JackieB_38 JackieB_39 JackieB_40 JackieB_41 JackieB_42 JackieB_43 JackieB_44 JackieB_45 JackieB_46 JackieB_47 JackieB_48 JackieB_49 JackieB_50 JackieB_51 JackieB_52 JackieB_53 JackieB_54 JackieB_55 JackieB_56 JackieB_57 JackieB_58 JackieB_59 JackieB_60 JackieB_61 JackieB_62 JackieB_63 JackieB_64 JackieB_65 JackieB_66 JackieB_67 JackieB_68 JackieB_69 JackieB_70 JackieB_71 JackieB_72 JackieB_73 JackieB_74 JackieB_75 JackieB_76 JackieB_77 JackieB_78 JackieB_79 JackieB_80 JackieB_81 JackieB_82 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH229863 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 70 |
| Pitt Freezer Box Grid# | F5 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| GenBank File for Phamerator | Download |
