Gordonia phage Jojo24
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Detailed Information for Phage Jojo24
Discovery Information
Isolation HostGordonia terrae 3612
Found ByYufeng
Year Found2018
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature4°C
GPS Coordinates40.443298 N, 79.953489 W Map
Discovery NotesThe sample was collected from a 300 ft ground with grass on it at a cloudy night.
The collection location - near the Bigelow Blvd, and the time - 8:13 PM on 8/29/2018.
Naming NotesForm an anime called Jojo. Looking forward more research and hopefully name the next one HYB, after an awesome anime painter.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 25, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1887
Genome length (bp)40579
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCCGGAGGTA
GC Content67.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDY
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members

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Annotating InstitutionUnknown or unassigned
Annotation StatusPlanless
Plaque NotesJojo24 is a mixed morphology phage with plaques ranging from 1-3 mm in size.
They appear clear, pointing to a lytic life cycle.
Jojo24 has a long tail that measures approximately 200 nm and a round
head that measures 50 nm in diameter, classifying it as a myoviridae
MorphotypeMyoviridae
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 90
Pitt Freezer Box Grid# D3
Available Files
Plaque PictureDownload
EM PictureDownload