Detailed Information for Phage Reyja |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Duplicates of this Phage | Nittany |
Found By | Shumeng Yang |
Year Found | 2016 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.443232 N, 79.95149 W Map |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 9, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 2021 |
Genome length (bp) | 41500 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | TCCGGAGGTA |
GC Content | 67.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DY |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Lysogeny Notes | Reyja is a temperate phage. |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Plaque Notes | Reyja produces small, clear plaques with undefined edges |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MK814759 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
4.6666667 * 10^10 pfu/mL |
Pitt Freezer Box# |
42 |
Pitt Freezer Box Grid# |
G6 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |