Detailed Information for Phage Jollymon |
Discovery Information |
Isolation Host | Gordonia rubripertincta NRRL B-16540 |
Found By | Meghan Bechman |
Year Found | 2023 |
Location Found | Pittsburgh, PA United States |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 40.442684 N, 79.942696 W Map |
Discovery Notes | Found with the assistance of Pitt Ecology: Meghan Bhakta, Christopher Gabriel, Amber Stanley, and Tea Treherne |
Naming Notes | Named after a character in one of my favorite children's books |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jul 2, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Sequencer Used | Illumina NextSeq 1000 |
Read Type | Single-end reads |
Read Length | 100 bp |
Approximate Shotgun Coverage | 708 |
Genome length (bp) | 58067 |
Character of genome ends | Circularly Permuted |
GC Content | 65.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CP |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | QC Complete |
Plaque Notes | Small (1mm) clear plaques |
Morphotype | Siphoviridae |
Number of Genes | 90 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
188 |
Pitt Freezer Box Grid# |
H5 |
Available Files |
GenBank File for Phamerator | Download |