| Detailed Information for Phage DonTron | |
| Discovery Information | |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Alyssa Williams |
| Year Found | 2023 |
| Location Found | New Albany, IN United States |
| Finding Institution | Indiana University-Southeast |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 26°C |
| GPS Coordinates | 38.34724 N, 85.82167 W Map |
| Discovery Notes | Alyssa found this sample location on the Bicentennial trail on campus. Its exact GPS coordinates are 38.347.24 degrees north, and 85.82167 degrees west. It was 90 degrees Fahrenheit outside and sunny. The soil was dug from about 2 inches in the ground. It was by a freshly fallen tree. The soil was dry and loose. It contained roots and tiny twigs and was light brown with a sandy texture |
| Naming Notes | "DonTron" came from a TV show called Rise: of the TMNT. It is a character named Donnie's nickname in the show, and we thought that it would be a good name for our phage instead of just our initials. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 2, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 163 |
| Genome length (bp) | 58182 |
| Character of genome ends | Circularly Permuted |
| GC Content | 65.4% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | CP |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members | |
| Annotating Institution | Indiana University-Southeast |
| Annotation Status | Overdue (Expected completion by 5/1/2024) |
| Plaque Notes | The plaques of our phage are transparent and range from 1mm –2mm in diameter. We have a lot of variability between our plaques. For example, we have some that are more rectangular with rough edges and some that are completely round with even edges. |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewDonTron_Draft_1 DonTron_Draft_2 DonTron_Draft_3 DonTron_Draft_4 DonTron_Draft_5 DonTron_Draft_6 DonTron_Draft_7 DonTron_Draft_8 DonTron_Draft_9 DonTron_Draft_10 DonTron_Draft_11 DonTron_Draft_12 DonTron_Draft_13 DonTron_Draft_14 DonTron_Draft_15 DonTron_Draft_16 DonTron_Draft_17 DonTron_Draft_18 DonTron_Draft_19 DonTron_Draft_20 DonTron_Draft_21 DonTron_Draft_22 DonTron_Draft_23 DonTron_Draft_24 DonTron_Draft_25 DonTron_Draft_26 DonTron_Draft_27 DonTron_Draft_28 DonTron_Draft_29 DonTron_Draft_30 DonTron_Draft_31 DonTron_Draft_32 DonTron_Draft_33 DonTron_Draft_34 DonTron_Draft_35 DonTron_Draft_36 DonTron_Draft_37 DonTron_Draft_38 DonTron_Draft_39 DonTron_Draft_40 DonTron_Draft_41 DonTron_Draft_42 DonTron_Draft_43 DonTron_Draft_44 DonTron_Draft_45 DonTron_Draft_46 DonTron_Draft_47 DonTron_Draft_48 DonTron_Draft_49 DonTron_Draft_50 DonTron_Draft_51 DonTron_Draft_52 DonTron_Draft_53 DonTron_Draft_54 DonTron_Draft_55 DonTron_Draft_56 DonTron_Draft_57 DonTron_Draft_58 DonTron_Draft_59 DonTron_Draft_60 DonTron_Draft_61 DonTron_Draft_62 DonTron_Draft_63 DonTron_Draft_64 DonTron_Draft_65 DonTron_Draft_66 DonTron_Draft_67 DonTron_Draft_68 DonTron_Draft_69 DonTron_Draft_70 DonTron_Draft_71 DonTron_Draft_72 DonTron_Draft_73 DonTron_Draft_74 DonTron_Draft_75 DonTron_Draft_76 DonTron_Draft_77 DonTron_Draft_78 DonTron_Draft_79 DonTron_Draft_80 DonTron_Draft_81 DonTron_Draft_82 DonTron_Draft_83 DonTron_Draft_84 DonTron_Draft_85 DonTron_Draft_86 DonTron_Draft_87 DonTron_Draft_88 DonTron_Draft_89 DonTron_Draft_90 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 184 |
| Pitt Freezer Box Grid# | A1 |
| Available Files | |
| Plaque Picture | Download |
| EM Picture | Download |