| Detailed Information for Phage Soos | |
| Discovery Information | |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Bryce Kunard and Anna Wheeler |
| Year Found | 2022 |
| Location Found | New Albany, IN United States |
| Finding Institution | Indiana University Southeast |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 26°C |
| GPS Coordinates | 38.34446 N, 85.81798 W Map |
| Discovery Notes | The weather was 61°F, sunny but chilly, some clouds. conditions; under a rock on campus, moist and damp, containing worms, and very clumpy on (9/14/22). This sample was adopted from Yucita De La Paz. |
| Naming Notes | A show I recently watched and loved was Gravity Falls. We had to come up with a unique name for our phage so I thought about Soos because I felt that was a name that not many people had chosen and it was easy to remember because of how much I loved that show. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 4, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 39 |
| Genome length (bp) | 57509 |
| Character of genome ends | Circularly Permuted |
| GC Content | 65.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | CP |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members | |
| Annotating Institution | Indiana University Southeast |
| Annotation Status | Being Annotated (Expected completion by 5/1/2023) |
| Plaque Notes | Round, relatively small, cloudy on some and clear on others. On different plates, the plaques were ranging from being close to each other than others were far apart. Some plaques were difficult to see and really had to be looked at in the light to see if there were any plaques. Plaque diameter is 2-3 mm. |
| Morphotype | Siphoviridae |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewSoos_Draft_1 Soos_Draft_2 Soos_Draft_3 Soos_Draft_4 Soos_Draft_5 Soos_Draft_6 Soos_Draft_7 Soos_Draft_8 Soos_Draft_9 Soos_Draft_10 Soos_Draft_11 Soos_Draft_12 Soos_Draft_13 Soos_Draft_14 Soos_Draft_15 Soos_Draft_16 Soos_Draft_17 Soos_Draft_18 Soos_Draft_19 Soos_Draft_20 Soos_Draft_21 Soos_Draft_22 Soos_Draft_23 Soos_Draft_24 Soos_Draft_25 Soos_Draft_26 Soos_Draft_27 Soos_Draft_28 Soos_Draft_29 Soos_Draft_30 Soos_Draft_31 Soos_Draft_32 Soos_Draft_33 Soos_Draft_34 Soos_Draft_35 Soos_Draft_36 Soos_Draft_37 Soos_Draft_38 Soos_Draft_39 Soos_Draft_40 Soos_Draft_41 Soos_Draft_42 Soos_Draft_43 Soos_Draft_44 Soos_Draft_45 Soos_Draft_46 Soos_Draft_47 Soos_Draft_48 Soos_Draft_49 Soos_Draft_50 Soos_Draft_51 Soos_Draft_52 Soos_Draft_53 Soos_Draft_54 Soos_Draft_55 Soos_Draft_56 Soos_Draft_57 Soos_Draft_58 Soos_Draft_59 Soos_Draft_60 Soos_Draft_61 Soos_Draft_62 Soos_Draft_63 Soos_Draft_64 Soos_Draft_65 Soos_Draft_66 Soos_Draft_67 Soos_Draft_68 Soos_Draft_69 Soos_Draft_70 Soos_Draft_71 Soos_Draft_72 Soos_Draft_73 Soos_Draft_74 Soos_Draft_75 Soos_Draft_76 Soos_Draft_77 Soos_Draft_78 Soos_Draft_79 Soos_Draft_80 Soos_Draft_81 Soos_Draft_82 Soos_Draft_83 Soos_Draft_84 Soos_Draft_85 Soos_Draft_86 Soos_Draft_87 Soos_Draft_88 Soos_Draft_89 Soos_Draft_90 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Not in Pitt Archives |
| Available Files | |
| Plaque Picture | Download |
| EM Picture | Download |
