Gordonia phage JonJames
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Detailed Information for Phage JonJames
Discovery Information
Isolation HostGordonia terrae 3612
Found ByJonathan Jang and James Carpenter
Year Found2021
Location FoundColumbus, OH USA
Finding InstitutionThe Ohio State University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.006 N, 83.013 W Map
Discovery NotesSoil collected near tree bed along Neil Ave
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 18, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage432
Genome length (bp)100446
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGCGAAGCTC
GC Content59.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDD
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionThe Ohio State University
Annotation StatusIn GenBank
Number of Genes196
Number of tRNAs6
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

JonJames_1

JonJames_2

JonJames_3

JonJames_4

JonJames_5

JonJames_6

JonJames_7

JonJames_8

JonJames_9

JonJames_10

JonJames_11

JonJames_12

JonJames_13
(HNH endonuclease)

JonJames_14

JonJames_15

JonJames_16

JonJames_17

JonJames_18 — tRNA
(tRNA-Phe(gaa))

JonJames_19 — tRNA
(tRNA-Asn(gtt))

JonJames_20 — tRNA
(tRNA-Trp(cca))

JonJames_21

JonJames_22 — tRNA
(tRNA-Asp(gtc))

JonJames_23 — tRNA
(tRNA-Ser(cga))

JonJames_24 — tRNA
(tRNA-Ser(gct))

JonJames_25
(glycosyltransferase)

JonJames_26
(HNH endonuclease)

JonJames_27
(glycosyltransferase)

JonJames_28

JonJames_29
(terminase small subunit)

JonJames_30
(terminase large subunit)

JonJames_31
(portal protein)

JonJames_32
(capsid maturation protease)

JonJames_33
(scaffolding protein)

JonJames_34
(capsid decoration protein)

JonJames_35
(major capsid protein)

JonJames_36

JonJames_37

JonJames_38

JonJames_39
(tail terminator)

JonJames_40
(endonuclease VII)

JonJames_41
(major tail protein)

JonJames_42

JonJames_43
(tail assembly chaperone)

JonJames_44
(tail assembly chaperone)

JonJames_45
(tape measure protein)

JonJames_46
(minor tail protein)

JonJames_47
(minor tail protein)

JonJames_48
(HNH endonuclease)

JonJames_49
(endolysin, protease M15 domain)

JonJames_50
(endolysin, glycosyl hydrolase domain)

JonJames_51

JonJames_52

JonJames_53

JonJames_54
(minor tail protein)

JonJames_55
(minor tail protein)

JonJames_56

JonJames_57

JonJames_58

JonJames_59

JonJames_60

JonJames_61
(serine protease)

JonJames_62

JonJames_63
(exonuclease VII, large subunit)

JonJames_64
(exonuclease VII, small subunit)

JonJames_65

JonJames_66

JonJames_67

JonJames_68

JonJames_69

JonJames_70

JonJames_71

JonJames_72
(RNA ligase)

JonJames_73
(HNH endonuclease)

JonJames_74

JonJames_75

JonJames_76
(HNH endonuclease)

JonJames_77
(phosphoesterase)

JonJames_78

JonJames_79

JonJames_80

JonJames_81

JonJames_82

JonJames_83

JonJames_84

JonJames_85

JonJames_86

JonJames_87

JonJames_88

JonJames_89

JonJames_90

JonJames_91

JonJames_92

JonJames_93

JonJames_94

JonJames_95

JonJames_96

JonJames_97
(tyrosine integrase)

JonJames_98

JonJames_99

JonJames_100
(RecE-like exonuclease)

JonJames_101

JonJames_102

JonJames_103

JonJames_104

JonJames_105

JonJames_106

JonJames_107

JonJames_108

JonJames_109
(RecT-like DNA pairing protein)

JonJames_110

JonJames_111

JonJames_112
(excise)

JonJames_113
(ThyX-like thymidylate synthase)

JonJames_114

JonJames_115

JonJames_116

JonJames_117

JonJames_118

JonJames_119

JonJames_120

JonJames_121

JonJames_122

JonJames_123

JonJames_124

JonJames_125
(PTPc tyrosine phosphatase)

JonJames_126

JonJames_127

JonJames_128

JonJames_129
(DprA-like DNA processing chain A)

JonJames_130

JonJames_131
(DNA primase/ helicase)

JonJames_132

JonJames_133
(NrdH-like glutaredoxin)

JonJames_134

JonJames_135
(SSB protein)

JonJames_136

JonJames_137
(WhiB family transcription factor)

JonJames_138

JonJames_139

JonJames_140

JonJames_141

JonJames_142

JonJames_143

JonJames_144
(endonuclease VII)

JonJames_145

JonJames_146

JonJames_147

JonJames_148

JonJames_149
(HNH endonuclease)

JonJames_150
(nucleotidyltransferase)

JonJames_151

JonJames_152

JonJames_153

JonJames_154

JonJames_155

JonJames_156

JonJames_157

JonJames_158

JonJames_159

JonJames_160

JonJames_161

JonJames_162

JonJames_163

JonJames_164

JonJames_165

JonJames_166
(serine hydrolase)

JonJames_167

JonJames_168

JonJames_169

JonJames_170

JonJames_171

JonJames_172

JonJames_173

JonJames_174

JonJames_175

JonJames_176

JonJames_177

JonJames_178

JonJames_179

JonJames_180

JonJames_181

JonJames_182

JonJames_183

JonJames_184

JonJames_185

JonJames_186

JonJames_187

JonJames_188

JonJames_189

JonJames_190

JonJames_191

JonJames_192

JonJames_193

JonJames_194

JonJames_195

JonJames_196

JonJames_197

JonJames_198

JonJames_199

JonJames_200

JonJames_201

JonJames_202

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOR159664
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 143
Pitt Freezer Box Grid# H3
Available Files
GenBank File for PhameratorDownload