| Detailed Information for Phage Lizz |
| Discovery Information |
| Isolation Host | Streptomyces viridochromogenes DSM40736 |
| Found By | Jacob Cantrell and Lamia Eldarazi |
| Year Found | 2015 |
| Location Found | St. Louis, MO USA |
| Finding Institution | Washington University in St. Louis |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 31°C |
| GPS Coordinates | 38.646667 N, 90.314722 W Map |
| Discovery Notes | soil sample collected near bench in Elizabeth Gray Danforth Butterfly Garden.
soil: moist
depth: 5cm |
| Naming Notes | Lizz was named after Elizabeth Danforth, the namesake of the butterfly garden the soil sample was collected from. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jun 15, 2020 |
| Sequencing Facility | The McDonnell Genome Institute at Washington University |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 92 |
| Genome length (bp) | 69287 |
| Character of genome ends | Circularly Permuted |
| GC Content | 64.2% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | BN |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Washington University in St. Louis |
| Annotation Status | In GenBank |
| Plaque Notes | plaques are medium in size and clear. Dark area (halo) surrounding plaques. Some variation in size of plaques on final purification plate. |
| Morphotype | Siphoviridae |
| Number of Genes | 103 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MZ648036 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Not in Pitt Archives |
| SEA Designator |
Lizz |
| SEA Lysate Titer |
2.0x10^10 pfu/mL |
| Date of SEA Lysate Titering |
Oct 13, 2015 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
