Detailed Information for Phage Lucky10 | |
Discovery Information | |
Isolation Host | Gordonia terrae 3612 |
Found By | Kaitlyn Savage |
Year Found | 2015 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 40.442274 N, 79.955973 W Map |
Naming Notes | Named after my dog. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Nov 16, 2015 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Sequencer Used | Illumina MiSeq |
Read Type | Single-end reads |
Read Length | 150 bp |
Approximate Shotgun Coverage | 396 |
Genome length (bp) | 42979 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CTCAGGGCAT |
GC Content | 65.4% |
Sequencing Notes | mixed sample approximately 25% of reads blast to Guacamole |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | DH |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
Click to View |
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | Round, clear plaques about 7mm in diameter. |
Morphotype | Siphoviridae |
Number of Genes | 70 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
Click to ViewLucky10_1 Lucky10_2 Lucky10_3 Lucky10_4 Lucky10_5 Lucky10_6 Lucky10_7 Lucky10_8 Lucky10_9 Lucky10_10 Lucky10_11 Lucky10_12 Lucky10_13 Lucky10_14 Lucky10_15 Lucky10_16 Lucky10_17 Lucky10_18 Lucky10_19 Lucky10_20 Lucky10_21 Lucky10_22 Lucky10_23 Lucky10_24 Lucky10_25 Lucky10_26 Lucky10_27 Lucky10_28 Lucky10_29 Lucky10_30 Lucky10_31 Lucky10_32 Lucky10_33 Lucky10_34 Lucky10_35 Lucky10_36 Lucky10_37 Lucky10_38 Lucky10_39 Lucky10_40 Lucky10_41 Lucky10_42 Lucky10_43 Lucky10_44 Lucky10_45 Lucky10_46 Lucky10_47 Lucky10_48 Lucky10_49 Lucky10_50 Lucky10_51 Lucky10_52 Lucky10_53 Lucky10_54 Lucky10_55 Lucky10_56 Lucky10_57 Lucky10_58 Lucky10_59 Lucky10_60 Lucky10_61 Lucky10_62 Lucky10_63 Lucky10_64 Lucky10_65 Lucky10_66 Lucky10_67 Lucky10_68 Lucky10_69 Lucky10_70 |
Publication Info | |
Uploaded to GenBank? | Yes |
GenBank Accession | KU963256 |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Archived |
Pitt Freezer Box# | 2 |
Pitt Freezer Box Grid# | G1 |
Available Files | |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |