Streptomyces phage LuckySocke
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Detailed Information for Phage LuckySocke
Discovery Information
Isolation HostStreptomyces lividans JI 1326
Found ByYingxi Wang, Zixiang Zhou
Year Found2022
Location FoundSaint Louis, MO United States
Finding InstitutionWashington University in St. Louis
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature23°C
GPS Coordinates38.647073 N, 90.304056 W Map
Naming NotesThe name Luckysocke is inspired by the campus cat in WashU called Socke. Since the cat wandered around the South 40 area, it is believed that the cat would being good luck if you saw it in the South 40 area. Thus, the phage is named Lucksocke.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 21, 2023
Sequencing FacilityThe McDonnell Genome Institute at Washington University
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage164
Genome length (bp)114564
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length344 bp
GC Content53.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBS
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members

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Annotating InstitutionWashington University in St. Louis
Annotation StatusIn GenBank
MorphotypeMyoviridae
Number of Genes190
Number of tRNAs30
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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LuckySocke_1

LuckySocke_2
(HNH endonuclease)

LuckySocke_3

LuckySocke_4

LuckySocke_5

LuckySocke_6

LuckySocke_7

LuckySocke_8
(ribbon-helix-helix DNA binding domain protein)

LuckySocke_9

LuckySocke_10

LuckySocke_11

LuckySocke_12

LuckySocke_13 — tRNA
(tRNA-Pro(tgg))

LuckySocke_14 — tRNA
(tRNA-Phe(gaa))

LuckySocke_15 — tRNA
(tRNA-Met(cat))

LuckySocke_16 — tRNA
(tRNA-Met(cat))

LuckySocke_17 — tRNA
(tRNA-Gly(tcc))

LuckySocke_18 — tRNA
(tRNA-Gln(ctg))

LuckySocke_19 — tRNA
(tRNA-Gln(ttg))

LuckySocke_20

LuckySocke_21 — tRNA
(tRNA-Asp(gtc))

LuckySocke_22

LuckySocke_23

LuckySocke_24 — tRNA
(tRNA-Glu(ctc))

LuckySocke_25 — tRNA
(tRNA-Glu(ttc))

LuckySocke_26

LuckySocke_27

LuckySocke_28 — tRNA
(tRNA-Thr(tgt))

LuckySocke_29 — tRNA
(tRNA-Thr(cgt))

LuckySocke_30 — tRNA
(tRNA-Thr(ggt))

LuckySocke_31 — tRNA
(tRNA-Leu(caa))

LuckySocke_32 — tRNA
(tRNA-Leu(tag))

LuckySocke_33

LuckySocke_34 — tRNA
(tRNA-Trp(cca))

LuckySocke_35 — tRNA
(tRNA-Asn(gtt))

LuckySocke_36 — tRNA
(tRNA-Ser(gct))

LuckySocke_37
(Ro-like RNA binding protein)

LuckySocke_38 — tRNA
(tRNA-Ala(tgc))

LuckySocke_39 — tRNA
(tRNA-Lys(ctt))

LuckySocke_40 — tRNA
(tRNA-Lys(ttt))

LuckySocke_41

LuckySocke_42
(peptidase)

LuckySocke_43
(tellurium resistance protein D family)

LuckySocke_44 — tRNA
(tRNA-Arg(acg))

LuckySocke_45

LuckySocke_46 — tRNA
(tRNA-Arg(tct))

LuckySocke_47

LuckySocke_48

LuckySocke_49

LuckySocke_50

LuckySocke_51 — tRNA
(tRNA-Val(tac))

LuckySocke_52 — tRNA
(tRNA-Ser(gct))

LuckySocke_53 — tRNA
(tRNA-Ser(gga))

LuckySocke_54 — tRNA
(tRNA-Ser(tga))

LuckySocke_55 — tRNA
(tRNA-Ile(gat))

LuckySocke_56
(thioredoxin)

LuckySocke_57 — tRNA
(tRNA-His(gtg))

LuckySocke_58

LuckySocke_59 — tRNA
(tRNA-Tyr(gta))

LuckySocke_60

LuckySocke_61
(RNA ligase)

LuckySocke_62

LuckySocke_63
(phosphoesterase)

LuckySocke_64
(endonuclease VII)

LuckySocke_65
(MazG-like nucleotide pyrophosphohydrolase)

LuckySocke_66

LuckySocke_67

LuckySocke_68

LuckySocke_69

LuckySocke_70
(terminase)

LuckySocke_71

LuckySocke_72

LuckySocke_73

LuckySocke_74

LuckySocke_75

LuckySocke_76
(portal protein)

LuckySocke_77
(scaffolding protein)

LuckySocke_78
(major capsid protein)

LuckySocke_79

LuckySocke_80

LuckySocke_81

LuckySocke_82

LuckySocke_83

LuckySocke_84
(tailspike protein)

LuckySocke_85

LuckySocke_86

LuckySocke_87
(minor tail protein)

LuckySocke_88
(tail sheath protein)

LuckySocke_89
(tail tube protein)

LuckySocke_90

LuckySocke_91

LuckySocke_92

LuckySocke_93
(minor tail protein)

LuckySocke_94

LuckySocke_95
(minor tail protein)

LuckySocke_96
(minor tail protein)

LuckySocke_97
(baseplate wedge protein)

LuckySocke_98
(baseplate J protein)

LuckySocke_99

LuckySocke_100
(minor tail protein)

LuckySocke_101
(minor tail protein)

LuckySocke_102

LuckySocke_103

LuckySocke_104

LuckySocke_105

LuckySocke_106

LuckySocke_107

LuckySocke_108

LuckySocke_109

LuckySocke_110
(DnaC-like helicase loader)

LuckySocke_111

LuckySocke_112

LuckySocke_113

LuckySocke_114
(nucleotidyl transferase)

LuckySocke_115

LuckySocke_116
(polynucleotide kinase)

LuckySocke_117

LuckySocke_118

LuckySocke_119

LuckySocke_120

LuckySocke_121

LuckySocke_122
(DnaB-like dsDNA helicase)

LuckySocke_123
(DNA primase)

LuckySocke_124
(DNA helicase)

LuckySocke_125
(host nuclease inhibitor)

LuckySocke_126

LuckySocke_127

LuckySocke_128

LuckySocke_129

LuckySocke_130

LuckySocke_131

LuckySocke_132

LuckySocke_133

LuckySocke_134

LuckySocke_135

LuckySocke_136

LuckySocke_137
(SSB protein)

LuckySocke_138
(DNA polymerase I)

LuckySocke_139

LuckySocke_140

LuckySocke_141
(ribonucleotide reductase)

LuckySocke_142

LuckySocke_143

LuckySocke_144

LuckySocke_145
(RecA-like DNA recombinase)

LuckySocke_146

LuckySocke_147

LuckySocke_148

LuckySocke_149
(RNA ligase)

LuckySocke_150

LuckySocke_151

LuckySocke_152

LuckySocke_153

LuckySocke_154

LuckySocke_155

LuckySocke_156

LuckySocke_157
(Holliday junction resolvase)

LuckySocke_158
(WhiB family transcription factor)

LuckySocke_159
(Cas4 exonuclease)

LuckySocke_160
(SSB protein)

LuckySocke_161

LuckySocke_162
(ThyX-like thymidylate synthase)

LuckySocke_163

LuckySocke_164

LuckySocke_165

LuckySocke_166

LuckySocke_167

LuckySocke_168

LuckySocke_169

LuckySocke_170
(DprA-like DNA processing chain A)

LuckySocke_171

LuckySocke_172

LuckySocke_173
(RuvC-like resolvase)

LuckySocke_174

LuckySocke_175

LuckySocke_176

LuckySocke_177

LuckySocke_178

LuckySocke_179

LuckySocke_180

LuckySocke_181
(peptidase)

LuckySocke_182

LuckySocke_183

LuckySocke_184

LuckySocke_185
(endolysin)

LuckySocke_186

LuckySocke_187
(phosphatase)

LuckySocke_188

LuckySocke_189

LuckySocke_190

LuckySocke_191

LuckySocke_192

LuckySocke_193

LuckySocke_194

LuckySocke_195

LuckySocke_196

LuckySocke_197
(ArdA-like antirestriction protein)

LuckySocke_198

LuckySocke_199

LuckySocke_200

LuckySocke_201

LuckySocke_202

LuckySocke_203

LuckySocke_204

LuckySocke_205

LuckySocke_206

LuckySocke_207

LuckySocke_208

LuckySocke_209

LuckySocke_210

LuckySocke_211

LuckySocke_212

LuckySocke_213

LuckySocke_214

LuckySocke_215

LuckySocke_216

LuckySocke_217

LuckySocke_218

LuckySocke_219

LuckySocke_220

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOR725497
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload