Detailed Information for Phage MementoMori |
Discovery Information |
Isolation Host | Microbacterium paraoxydans NWU1 |
Found By | Elijah Washburn |
Year Found | 2016 |
Location Found | LaVista, NE USA |
Finding Institution | Nebraska Wesleyan University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | 67°C |
GPS Coordinates | 41.187567 N, 95.972347 W Map |
Discovery Notes | This phage was isolated near the base of an oak tree. I dug about five inches down attempting to find soil near a root. |
Naming Notes | This phage had very small plaques from the very first isolation. The plaques size and number made it difficult to tell if I had truly isolated it, as well it was very difficult to find the correct titre to get a webbed plate, I persevered through the challenges and eventually completed my work on the phage. I decided to name it memento mori in honor of the great tradition the ancient Romans held after victory, memento mori is meant to remind me to be humble while i think of my work here, and to thank all those who helped me through it. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 25, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1128 |
Genome length (bp) | 55572 |
Character of genome ends | Circularly Permuted |
GC Content | 70.0% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EI |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members |
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Annotating Institution | Nebraska Wesleyan University |
Annotation Status | In GenBank |
Plaque Notes | This phage had very small clear plaques, that were circular and often seemed to overlap each other at lower titres. |
Number of Genes | 96 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH271303 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
45 |
Pitt Freezer Box Grid# |
E12 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |