Gordonia phage Miskis
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Detailed Information for Phage Miskis
Discovery Information
Isolation HostGordonia terrae 3612
Found ByMia Robinson and Arieus Shidiskis
Year Found2023
Location FoundMonroe, LA USA
Finding InstitutionUniversity of Louisiana at Monroe
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates32.52931 N, 92.07292 W Map
Discovery NotesUnder a tree by the bayou
Naming Notescombine our names
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 22, 2024
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina MiSeq
Read TypeSingle-end reads
Read Length150 bp
Approximate Shotgun Coverage251
Genome length (bp)92098
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGCGACGCTC
GC Content62.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCQ
SubclusterCQ1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Louisiana at Monroe
Annotation StatusIn GenBank
Plaque Notessmall and clear plaque
Number of Genes167
Number of tRNAs8
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Miskis_1

Miskis_2

Miskis_3
(DNA polymerase)

Miskis_4

Miskis_5

Miskis_6

Miskis_7

Miskis_8

Miskis_9

Miskis_10

Miskis_11

Miskis_12
(HNH endonuclease)

Miskis_13

Miskis_14

Miskis_15

Miskis_16

Miskis_17

Miskis_18 — tRNA
(tRNA-Ala(cgc))

Miskis_19 — tRNA
(tRNA-Trp(cca))

Miskis_20 — tRNA
(tRNA-OTHER (cgtg))

Miskis_21 — tRNA
(tRNA-Tyr(gta))

Miskis_22 — tRNA
(tRNA-Ser(cga))

Miskis_23 — tRNA
(tRNA-Ser(gct))

Miskis_24 — tRNA
(tRNA-Asn(gtt))

Miskis_25

Miskis_26 — tRNA
(tRNA-Lys(ctt))

Miskis_27

Miskis_28
(terminase)

Miskis_29
(portal protein)

Miskis_30
(capsid maturation protease)

Miskis_31
(scaffolding protein)

Miskis_32
(capsid decoration protein)

Miskis_33
(major capsid protein)

Miskis_34

Miskis_35
(head-to-tail adaptor)

Miskis_36
(head-to-tail stopper)

Miskis_37

Miskis_38
(tail terminator)

Miskis_39
(endonuclease VII)

Miskis_40
(major tail protein)

Miskis_41

Miskis_42
(tail assembly chaperone)

Miskis_43
(tail assembly chaperone)

Miskis_44
(tape measure protein)

Miskis_45
(minor tail protein)

Miskis_46
(minor tail protein)

Miskis_47
(lysin A, protease C39 domain)

Miskis_48
(lysin A, L-Ala-D-Glu peptidase domain)

Miskis_49
(holin)

Miskis_50

Miskis_51

Miskis_52

Miskis_53
(minor tail protein)

Miskis_54
(minor tail protein)

Miskis_55

Miskis_56
(minor tail protein)

Miskis_57

Miskis_58
(Lsr2-like DNA bridging protein)

Miskis_59

Miskis_60

Miskis_61
(exonuclease)

Miskis_62
(exonuclease)

Miskis_63

Miskis_64

Miskis_65

Miskis_66

Miskis_67
(MRE11 double-strand break repair endo/exonuclease)

Miskis_68

Miskis_69

Miskis_70
(rtcB-like RNA ligase)

Miskis_71
(HNH endonuclease)

Miskis_72

Miskis_73

Miskis_74

Miskis_75

Miskis_76
(tyrosine integrase)

Miskis_77

Miskis_78
(immunity repressor)

Miskis_79

Miskis_80
(RecE-like recombination exonuclease)

Miskis_81

Miskis_82

Miskis_83
(RecT- like ssDNA anneling protein)

Miskis_84

Miskis_85

Miskis_86
(ThyX-like thymidylate synthase)

Miskis_87

Miskis_88

Miskis_89

Miskis_90

Miskis_91

Miskis_92

Miskis_93

Miskis_94

Miskis_95

Miskis_96
(Helix-turn-helix DNA binding domain)

Miskis_97

Miskis_98

Miskis_99

Miskis_100
(MazG-like nucleotide pyrophosphate)

Miskis_101

Miskis_102

Miskis_103

Miskis_104

Miskis_105

Miskis_106

Miskis_107

Miskis_108

Miskis_109

Miskis_110

Miskis_111

Miskis_112

Miskis_113

Miskis_114

Miskis_115

Miskis_116

Miskis_117
(DNA primase/ helicase)

Miskis_118
(endonuclease)

Miskis_119

Miskis_120
(thioredoxin Domain)

Miskis_121
(ssDNA binding protein)

Miskis_122

Miskis_123
(transcriptional regulator)

Miskis_124

Miskis_125

Miskis_126

Miskis_127

Miskis_128

Miskis_129
(Endonuclease VII)

Miskis_130

Miskis_131

Miskis_132
(nucleotidyl transferase)

Miskis_133

Miskis_134

Miskis_135

Miskis_136

Miskis_137

Miskis_138
(5' Nucleotidase)

Miskis_139

Miskis_140

Miskis_141
(lysin B)

Miskis_142

Miskis_143

Miskis_144

Miskis_145

Miskis_146

Miskis_147

Miskis_148

Miskis_149

Miskis_150

Miskis_151

Miskis_152

Miskis_153

Miskis_154

Miskis_155

Miskis_156

Miskis_157

Miskis_158

Miskis_159

Miskis_160

Miskis_161

Miskis_162

Miskis_163

Miskis_164

Miskis_165

Miskis_166

Miskis_167

Miskis_168

Miskis_169

Miskis_170

Miskis_171

Miskis_172

Miskis_173

Miskis_174

Miskis_175

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPV251871
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 182
Pitt Freezer Box Grid# H4
Available Files
GenBank File for PhameratorDownload