Detailed Information for Phage Neville |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Lauren Andrews and Emma Bragdon |
Year Found | 2017 |
Location Found | Westford, MA USA |
Finding Institution | University of Maine, Honors College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 42.582525 N, 71.485782 W Map |
Discovery Notes | Soil sample taken from a garden/pumpkin patch. |
Naming Notes | We both like Harry Potter, and Neville Longbottom loves plants. This phage was discovered in a pumpkin patch so we thought why not name it Neville. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Mar 6, 2018 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 405 |
Genome length (bp) | 75813 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | ATCTGCCCCAC |
GC Content | 58.8% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DU |
Subcluster | DU2 |
Cluster Life Cycle | Unknown |
Lysogeny Notes | Neville is a temperate phage and forms lysogens. |
Other Cluster Members |
|
Annotating Institution | University of Maine, Honors College |
Annotation Status | In GenBank |
Plaque Notes | The plaques are turbid with a diameter of 2-3mm. |
Number of Genes | 129 |
Number of tRNAs | 7 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH651182 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
73 |
Pitt Freezer Box Grid# |
B6 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |