| Detailed Information for Phage PHTowN | |
| Discovery Information | |
| Isolation Host | Streptomyces viridochromogenes DSM40736 |
| Found By | Paulome Srivastava and Nina Manian |
| Year Found | 2015 |
| Location Found | St. Louis, MO USA |
| Finding Institution | Washington University in St. Louis |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Unknown |
| Isolation Temperature | Not entered |
| GPS Coordinates | 38.645556 N, 90.311306 W Map |
| Discovery Notes | Collected near the Burning Kumquat sign in the relatively undisturbed student garden. The sample was collected on 9/1/15 at 12:21pm at a depth of approximately 7cm. The sample itself was pretty dark, moist, and clumped together. |
| Naming Notes | PHTowN is a nod to our hometown of Houston, Texas aka H-Town. PHTowN also kinda sounds like "phage" and includes the first letters of both of our names, P and N. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Sep 18, 2019 |
| Sequencing Facility | The McDonnell Genome Institute at Washington University |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 130 |
| Genome length (bp) | 69271 |
| Character of genome ends | Circularly Permuted |
| GC Content | 64.3% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | BN |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | Washington University in St. Louis |
| Annotation Status | In GenBank |
| Plaque Notes | Small, clear, round plaques with distinct boundaries. |
| Number of Genes | 104 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewPHTowN_1 PHTowN_2 PHTowN_3 PHTowN_4 PHTowN_5 PHTowN_6 PHTowN_7 PHTowN_8 PHTowN_9 PHTowN_10 PHTowN_11 PHTowN_12 PHTowN_13 PHTowN_14 PHTowN_15 PHTowN_16 PHTowN_17 PHTowN_18 PHTowN_19 PHTowN_20 PHTowN_21 PHTowN_22 PHTowN_23 PHTowN_24 PHTowN_25 PHTowN_26 PHTowN_27 PHTowN_28 PHTowN_29 PHTowN_30 PHTowN_31 PHTowN_32 PHTowN_33 PHTowN_34 PHTowN_35 PHTowN_36 PHTowN_37 PHTowN_38 PHTowN_39 PHTowN_40 PHTowN_41 PHTowN_42 PHTowN_43 PHTowN_44 PHTowN_45 PHTowN_46 PHTowN_47 PHTowN_48 PHTowN_49 PHTowN_50 PHTowN_51 PHTowN_52 PHTowN_53 PHTowN_54 PHTowN_55 PHTowN_56 PHTowN_57 PHTowN_58 PHTowN_59 PHTowN_60 PHTowN_61 PHTowN_62 PHTowN_63 PHTowN_64 PHTowN_65 PHTowN_66 PHTowN_67 PHTowN_68 PHTowN_69 PHTowN_70 PHTowN_71 PHTowN_72 PHTowN_73 PHTowN_74 PHTowN_75 PHTowN_76 PHTowN_77 PHTowN_78 PHTowN_79 PHTowN_80 PHTowN_81 PHTowN_82 PHTowN_83 PHTowN_84 PHTowN_85 PHTowN_86 PHTowN_87 PHTowN_88 PHTowN_89 PHTowN_90 PHTowN_91 PHTowN_92 PHTowN_93 PHTowN_94 PHTowN_95 PHTowN_96 PHTowN_97 PHTowN_98 PHTowN_99 PHTowN_100 PHTowN_101 PHTowN_102 PHTowN_103 PHTowN_104 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MT498053 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Not in Pitt Archives |
| SEA Lysate Titer | 4.3*10^9 |
| Date of SEA Lysate Titering | Oct 13, 2015 |
| Available Files | |
| GenBank File for Phamerator | Download |