Gordonia phage PhorbesPhlower
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Detailed Information for Phage PhorbesPhlower
Discovery Information
Isolation HostGordonia terrae 3612
Duplicates of this PhageMykonos
Found ByAnna Maria Hervey
Year Found2016
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.442756 N, 79.956461 W Map
Naming NotesPhage was obtained from the direct plating of a soil sample taken from a flower box outside of the Litchfield Towers on Forbes Ave. hence PhorbesPhlower.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJun 22, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage3920
Genome length (bp)41486
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCTCAAGGCAT
GC Content65.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDH
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members

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Annotating InstitutionUniversity of Wisconsin-River Falls
Annotation StatusIn GenBank
Plaque NotesThe phage appears to have to separate morphologies, forming both large and small plaques. I have picked from a single plaque and created dilutions from said pickings multiple times to confirm this finding.
MorphotypeSiphoviridae
Number of Genes72
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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PhorbesPhlower_1

PhorbesPhlower_2
(terminase)

PhorbesPhlower_3
(portal protein)

PhorbesPhlower_4
(minor capsid protein)

PhorbesPhlower_5
(scaffolding protein)

PhorbesPhlower_6
(major capsid protein)

PhorbesPhlower_7

PhorbesPhlower_8
(head-to-tail adaptor)

PhorbesPhlower_9
(head-to-tail stopper)

PhorbesPhlower_10

PhorbesPhlower_11
(tail terminator)

PhorbesPhlower_12
(major tail protein)

PhorbesPhlower_13

PhorbesPhlower_14

PhorbesPhlower_15

PhorbesPhlower_16
(tape measure protein)

PhorbesPhlower_17
(minor tail protein)

PhorbesPhlower_18
(minor tail protein)

PhorbesPhlower_19

PhorbesPhlower_20
(lysin A)

PhorbesPhlower_21

PhorbesPhlower_22

PhorbesPhlower_23

PhorbesPhlower_24
(lysin B)

PhorbesPhlower_25

PhorbesPhlower_26

PhorbesPhlower_27
(minor tail protein)

PhorbesPhlower_28

PhorbesPhlower_29

PhorbesPhlower_30

PhorbesPhlower_31

PhorbesPhlower_32

PhorbesPhlower_33
(tyrosine integrase)

PhorbesPhlower_34
(helix-turn-helix DNA-binding domain protein)

PhorbesPhlower_35
(metallopeptidase)

PhorbesPhlower_36
(immunity repressor)

PhorbesPhlower_37
(helix-turn-helix DNA-binding domain protein)

PhorbesPhlower_38
(HNH endonuclease)

PhorbesPhlower_39

PhorbesPhlower_40

PhorbesPhlower_41
(ParB-like nuclease domain protein)

PhorbesPhlower_42

PhorbesPhlower_43
(antirepressor)

PhorbesPhlower_44

PhorbesPhlower_45

PhorbesPhlower_46

PhorbesPhlower_47

PhorbesPhlower_48

PhorbesPhlower_49
(exonuclease)

PhorbesPhlower_50

PhorbesPhlower_51

PhorbesPhlower_52
(methyltransferase)

PhorbesPhlower_53

PhorbesPhlower_54

PhorbesPhlower_55

PhorbesPhlower_56

PhorbesPhlower_57

PhorbesPhlower_58

PhorbesPhlower_59

PhorbesPhlower_60

PhorbesPhlower_61

PhorbesPhlower_62
(DNA methyltransferase)

PhorbesPhlower_63
(helix-turn-helix DNA-binding domain protein)

PhorbesPhlower_64

PhorbesPhlower_65

PhorbesPhlower_66
(RusA-like resolvase)

PhorbesPhlower_67

PhorbesPhlower_68

PhorbesPhlower_69
(helix-turn-helix DNA-binding domain protein)

PhorbesPhlower_70

PhorbesPhlower_71

PhorbesPhlower_72
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN175604
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 3
Pitt Freezer Box Grid# H10
Available Files
GenBank File for PhameratorDownload