Detailed Information for Phage QuinnAvery | |
Discovery Information | |
Isolation Host | Arthrobacter globiformis B-2979 |
Found By | R. Cass, G, Asuresh, H. Gesinski, A. Nene |
Year Found | 2024 |
Location Found | Linthicum, MD United States |
Finding Institution | University of Pittsburgh at Greensburg |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 39.2015 N, 76.68484 W Map |
Discovery Notes | QuinnAvery was found by professor Jennifer Ingram at the Phage Discovery Workshop 17A. It was outside the hotel under a Lantana flower bush. |
Naming Notes | QuinnAvery is named after professor Ingram’s daughter. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Oct 22, 2024 |
Sequencing Facility | HHMI SEAquencing Core |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 5933 |
Genome length (bp) | 43177 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 12 bases |
Overhang Sequence | TCCGCCGCGTGA |
GC Content | 64.9% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | FF |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members | |
Annotating Institution | University of Pittsburgh at Greensburg |
Annotation Status | Being Annotated (Expected completion by 4/22/2025) |
Plaque Notes | QuinnAvery has a bullseye morphology, they are turbid, and they are 1.5mm to 2mm in size. |
Morphotype | Siphoviridae |
Number of Genes | 65 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
Click to ViewQuinnAvery_1 QuinnAvery_2 QuinnAvery_3 QuinnAvery_4 QuinnAvery_5 QuinnAvery_6 QuinnAvery_7 QuinnAvery_8 QuinnAvery_9 QuinnAvery_10 QuinnAvery_11 QuinnAvery_12 QuinnAvery_13 QuinnAvery_14 QuinnAvery_15 QuinnAvery_16 QuinnAvery_17 QuinnAvery_18 QuinnAvery_19 QuinnAvery_20 QuinnAvery_21 QuinnAvery_22 QuinnAvery_23 QuinnAvery_24 QuinnAvery_25 QuinnAvery_26 QuinnAvery_27 QuinnAvery_28 QuinnAvery_29 QuinnAvery_30 QuinnAvery_31 QuinnAvery_32 QuinnAvery_33 QuinnAvery_34 QuinnAvery_35 QuinnAvery_36 QuinnAvery_37 QuinnAvery_38 — tRNA QuinnAvery_39 QuinnAvery_40 QuinnAvery_41 QuinnAvery_42 QuinnAvery_43 QuinnAvery_44 QuinnAvery_45 QuinnAvery_46 QuinnAvery_47 QuinnAvery_48 QuinnAvery_49 QuinnAvery_50 QuinnAvery_51 QuinnAvery_52 QuinnAvery_53 QuinnAvery_54 QuinnAvery_55 QuinnAvery_56 QuinnAvery_57 QuinnAvery_58 QuinnAvery_59 QuinnAvery_60 QuinnAvery_61 QuinnAvery_62 QuinnAvery_63 QuinnAvery_64 QuinnAvery_65 QuinnAvery_66 |
Publication Info | |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Not in Pitt Archives |
Available Files | |
EM Picture | Download |