| Detailed Information for Phage RainyPolka | |
| Discovery Information | |
| Isolation Host | Streptomyces griseus ATCC 10137 |
| Found By | Shih-Hsien Kuo, Fang-Tzu Li, Zu-Yi Won |
| Year Found | 2022 |
| Location Found | Taoyuan, Taiwan, R. O. C. |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Unknown |
| Isolation Temperature | Not entered |
| GPS Coordinates | 24.960418 N, 121.187558 E Map |
| Discovery Notes | RainyPolka was discovered from the soil in the Taoyuan city at Taiwan. It is a result of the Environmental Microbiology Lab course in National Taiwan University, and part of the PET (Phage Ensemble in Taiwan) program |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Nov 8, 2023 |
| Sequencing Facility | NC State Genomic Sciences Laboratory |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 1849 |
| Genome length (bp) | 56882 |
| Character of genome ends | Circularly Permuted |
| GC Content | 69.2% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | BG |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to View |
| Annotating Institution | National Taiwan University |
| Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
| Plaque Notes | Size: Head (75 nm x 75 nm); tail (325nm x12.5 nm) Plaque size: 1 mm (diameter) Plaque shape: round to oval with blurred edges |
| Number of Genes | 70 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewRainyPolka_1 RainyPolka_2 RainyPolka_3 RainyPolka_4 RainyPolka_5 RainyPolka_6 RainyPolka_7 RainyPolka_8 RainyPolka_9 RainyPolka_10 RainyPolka_11 RainyPolka_12 RainyPolka_13 RainyPolka_14 RainyPolka_15 RainyPolka_16 RainyPolka_17 RainyPolka_18 RainyPolka_19 RainyPolka_20 RainyPolka_21 RainyPolka_22 RainyPolka_23 RainyPolka_24 RainyPolka_25 RainyPolka_26 RainyPolka_27 RainyPolka_28 RainyPolka_29 RainyPolka_30 RainyPolka_31 RainyPolka_32 RainyPolka_33 RainyPolka_34 RainyPolka_35 RainyPolka_36 RainyPolka_37 RainyPolka_38 RainyPolka_39 RainyPolka_40 RainyPolka_41 RainyPolka_42 RainyPolka_43 RainyPolka_44 RainyPolka_45 RainyPolka_46 RainyPolka_47 RainyPolka_48 RainyPolka_49 RainyPolka_50 RainyPolka_51 RainyPolka_52 RainyPolka_53 RainyPolka_54 RainyPolka_55 RainyPolka_56 RainyPolka_57 RainyPolka_58 RainyPolka_59 RainyPolka_60 RainyPolka_61 RainyPolka_62 RainyPolka_63 RainyPolka_64 RainyPolka_65 RainyPolka_66 RainyPolka_67 RainyPolka_68 RainyPolka_69 RainyPolka_70 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Not in Pitt Archives |
| Available Files | |
| EM Picture | Download |