| Detailed Information for Phage Rowa | |
| Discovery Information | |
| Isolation Host | Streptomyces azureus NRRL B-2655 |
| Found By | Ahmad Sulaiman |
| Year Found | 2016 |
| Location Found | New Braunfels, TX USA |
| Finding Institution | University of North Texas |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 24°C |
| GPS Coordinates | 29.711028 N, 98.133833 W Map |
| Discovery Notes | The soil sample was collected from Landa Park in New Braunfels, TX. The temperatures was 24°C, and the soil was wet. The sample was taken 2 cm under surface. |
| Naming Notes | It's a girl name in Arabic. It gives the meaning of saturation.I like this name and it might be the name of my daughter in future |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Mar 6, 2017 |
| Sequencing Facility | University of North Texas |
| Shotgun Sequencing Method | Illumina |
| Genome length (bp) | 42890 |
| Character of genome ends | Unknown |
| Overhang Length | 9 bases |
| Overhang Sequence | CGGCAGGGA |
| GC Content | 61.2% |
| Sequencing Notes | Because this phage was sequenced using a tagmentation library-prep protocol, we can't be 100% sure about the ends and overhang, but there is strong evidence that we have called the correct base 1 and overhang, partly through similarity to related phages. |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | BL |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
Click to View |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | the diameter is 0.5 mm. It makes cloudy zone in the spot test. |
| Morphotype | Siphoviridae |
| Number of Genes | 62 |
| Number of tRNAs | 7 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewRowa_1 Rowa_2 Rowa_3 Rowa_4 Rowa_5 Rowa_6 Rowa_7 Rowa_8 Rowa_9 Rowa_10 Rowa_11 Rowa_12 Rowa_13 Rowa_14 Rowa_15 Rowa_16 Rowa_17 Rowa_18 Rowa_19 Rowa_20 Rowa_21 Rowa_22 Rowa_23 Rowa_24 Rowa_25 Rowa_26 Rowa_27 Rowa_28 Rowa_29 Rowa_30 Rowa_31 Rowa_32 Rowa_33 Rowa_34 Rowa_35 Rowa_36 Rowa_37 Rowa_38 Rowa_39 Rowa_40 Rowa_41 Rowa_42 Rowa_43 Rowa_44 Rowa_45 Rowa_46 Rowa_47 Rowa_48 Rowa_49 Rowa_50 Rowa_51 Rowa_52 Rowa_53 Rowa_54 Rowa_55 Rowa_56 Rowa_57 Rowa_58 Rowa_59 Rowa_60 Rowa_61 — tRNA Rowa_62 — tRNA Rowa_63 — tRNA Rowa_64 — tRNA Rowa_65 — tRNA Rowa_66 — tRNA Rowa_67 — tRNA Rowa_68 Rowa_69 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MG593803 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 3.2x10^8 pfu/mL |
| Pitt Freezer Box# | 36 |
| Pitt Freezer Box Grid# | H4 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
