| Detailed Information for Phage Samora | |
| Discovery Information | |
| Isolation Host | Streptomyces baarnensis NRRL B-2842 |
| Found By | Caitlin Johnson |
| Year Found | 2023 |
| Location Found | Denton, TX United States |
| Finding Institution | University of North Texas |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 33.21049 N, 97.14843 W Map |
| Discovery Notes | Obtained from the garden outside of the Eagle Student Services Center. 1 inch under a dirt patch with some Gomphrena and white portulaca grandiflora flowers. Dirt was primarily dry and silty. Temperature was 101°F. |
| Naming Notes | Named after my mom's maiden name. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 12, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 148 |
| Genome length (bp) | 41794 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CCCGGCCCCA |
| GC Content | 62.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | BB |
| Subcluster | BB1 |
| Cluster Life Cycle | Temperate |
| Lysogeny Notes | Tested positive in lysogeny. |
| Other Cluster Members | |
| Annotating Institution | University of North Texas |
| Annotation Status | In GenBank |
| Plaque Notes | Average plaque size was about 0.5 mm. Plaques were all cloudy. |
| Number of Genes | 59 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewSamora_1 Samora_2 Samora_3 Samora_4 Samora_5 Samora_6 Samora_7 Samora_8 Samora_9 Samora_10 Samora_11 Samora_12 Samora_13 Samora_14 Samora_15 Samora_16 Samora_17 Samora_18 Samora_19 Samora_20 Samora_21 Samora_22 Samora_23 Samora_24 Samora_25 Samora_26 Samora_27 Samora_28 Samora_29 Samora_30 Samora_31 Samora_32 Samora_33 Samora_34 Samora_35 Samora_36 Samora_37 Samora_38 Samora_39 Samora_40 Samora_41 Samora_42 Samora_43 Samora_44 Samora_45 Samora_46 Samora_47 Samora_48 Samora_49 Samora_50 Samora_51 Samora_52 Samora_53 Samora_54 Samora_55 Samora_56 Samora_57 Samora_58 Samora_59 — tRNA Samora_60 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PP978777 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 174 |
| Pitt Freezer Box Grid# | G6 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| GenBank File for Phamerator | Download |
