Gordonia phage Smoothie
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Detailed Information for Phage Smoothie
Discovery Information
Isolation HostGordonia terrae 3612
Found ByMatthew Montgomery
Year Found2015
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates40.447148 N, 79.958633 W Map
Naming NotesSmoothies are a healthy and delicious beverage that I enjoy.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 5, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage687
Genome length (bp)93139
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGCGACGCTC
GC Content61.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCQ
SubclusterCQ1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes179
Number of tRNAs8
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Smoothie_1

Smoothie_2

Smoothie_3

Smoothie_4

Smoothie_5

Smoothie_6

Smoothie_7

Smoothie_8

Smoothie_9

Smoothie_10

Smoothie_11

Smoothie_12

Smoothie_13

Smoothie_14
(HNH endonuclease)

Smoothie_15

Smoothie_16

Smoothie_17

Smoothie_18

Smoothie_19

Smoothie_20 — tRNA
(tRNA Undet; tRNA Undetermined Score: 31.40)

Smoothie_21 — tRNA
(tRNA Undet; tRNA Undetermined Score: 32.86)

Smoothie_22 — tRNA
(tRNA-Trp(cca) Score: 75.25)

Smoothie_23 — tRNA
(tRNA Tyr (gta) score: 29.43)

Smoothie_24 — tRNA
(tRNA Ser (cga) Score: 11.61)

Smoothie_25 — tRNA
(tRNA Sera; tRNA Ser (gct) Score: 7.90)

Smoothie_26
(HNH endonuclease)

Smoothie_27 — tRNA
(tRNA-Asn(gtt) score: 83.92)

Smoothie_28

Smoothie_29 — tRNA
(tRNA-Lys(ctt) score: 81.93)

Smoothie_30

Smoothie_31
(terminase)

Smoothie_32
(portal protein)

Smoothie_33
(MuF-like minor capsid protein)

Smoothie_34

Smoothie_35
(capsid decoration protein)

Smoothie_36
(major capsid protein)

Smoothie_37

Smoothie_38

Smoothie_39

Smoothie_40

Smoothie_41
(tail terminator)

Smoothie_42
(holliday junction resolvase)

Smoothie_43

Smoothie_44

Smoothie_45
(tail assembly chaperone)

Smoothie_46
(tail assembly chaperone)

Smoothie_47
(tape measure protein)

Smoothie_48
(minor tail protein)

Smoothie_49
(minor tail protein)

Smoothie_50
(lysin A, protease C39 domain)

Smoothie_51
(HNH endonuclease)

Smoothie_52
(lysin A, L-Ala-D-Glu peptidase domain)

Smoothie_53

Smoothie_54

Smoothie_55

Smoothie_56

Smoothie_57
(minor tail protein)

Smoothie_58
(minor tail protein)

Smoothie_59

Smoothie_60

Smoothie_61

Smoothie_62

Smoothie_63

Smoothie_64

Smoothie_65

Smoothie_66
(exonuclease VII)

Smoothie_67

Smoothie_68

Smoothie_69

Smoothie_70

Smoothie_71
(MRE11 double-strand break repair endo/exonuclease)

Smoothie_72

Smoothie_73

Smoothie_74
(RtcB-like RNA ligase)

Smoothie_75

Smoothie_76

Smoothie_77

Smoothie_78

Smoothie_79

Smoothie_80

Smoothie_81

Smoothie_82

Smoothie_83

Smoothie_84

Smoothie_85
(tyrosine integrase)

Smoothie_86

Smoothie_87
(immunity repressor)

Smoothie_88

Smoothie_89
(RecE-like exonuclease)

Smoothie_90

Smoothie_91

Smoothie_92
(RecT-like DNA pairing protein)

Smoothie_93
(ThyX-like thymidylate synthase)

Smoothie_94

Smoothie_95

Smoothie_96

Smoothie_97

Smoothie_98

Smoothie_99
(helix-turn-helix DNA binding protein)

Smoothie_100

Smoothie_101

Smoothie_102

Smoothie_103
(helix-turn-helix DNA binding protein)

Smoothie_104

Smoothie_105

Smoothie_106

Smoothie_107
(MazG-like nucleotide pyrophosphate)

Smoothie_108

Smoothie_109

Smoothie_110

Smoothie_111

Smoothie_112

Smoothie_113

Smoothie_114

Smoothie_115

Smoothie_116

Smoothie_117

Smoothie_118
(CobT-like cobalamin biosynthesis protein)

Smoothie_119

Smoothie_120

Smoothie_121

Smoothie_122

Smoothie_123

Smoothie_124
(DNA primsae/helicase)

Smoothie_125

Smoothie_126
(thioredoxin)

Smoothie_127
(ssDNA binding protein)

Smoothie_128

Smoothie_129

Smoothie_130

Smoothie_131

Smoothie_132

Smoothie_133

Smoothie_134

Smoothie_135
(holliday junction resolvase)

Smoothie_136

Smoothie_137

Smoothie_138
(nucleotidyltransferase)

Smoothie_139

Smoothie_140

Smoothie_141

Smoothie_142

Smoothie_143

Smoothie_144

Smoothie_145
(phosphatase)

Smoothie_146

Smoothie_147
(deoxycytidylate deaminase)

Smoothie_148

Smoothie_149
(serine hydrolase)

Smoothie_150

Smoothie_151

Smoothie_152

Smoothie_153

Smoothie_154

Smoothie_155

Smoothie_156

Smoothie_157

Smoothie_158

Smoothie_159

Smoothie_160

Smoothie_161

Smoothie_162

Smoothie_163

Smoothie_164

Smoothie_165

Smoothie_166

Smoothie_167

Smoothie_168

Smoothie_169

Smoothie_170

Smoothie_171

Smoothie_172

Smoothie_173

Smoothie_174

Smoothie_175

Smoothie_176

Smoothie_177

Smoothie_178

Smoothie_179

Smoothie_180

Smoothie_181

Smoothie_182

Smoothie_183

Smoothie_184

Smoothie_185

Smoothie_186

Smoothie_187

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKU998244
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 4
Pitt Freezer Box Grid# G3
Available Files
Final DNAMaster FileDownload