| Detailed Information for Phage Splinter |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Carlos Guerrero |
| Year Found | 2013 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Phage Hunters Integrating Research and Education |
| From enriched soil sample? | Unknown |
| Isolation Temperature | Not entered |
| GPS Coordinates | 79.954301 W, 40.446910 N Map |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | May 26, 2015 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 3234 |
| Genome length (bp) | 45858 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 12 bases |
| Overhang Sequence | TCCGGGCCGGTA |
| GC Content | 66.1% |
| Sequencing Notes | This phage is very similar (only 2 nucleotide differences) to Vendetta. However, the sequencing data for Splinter showed that a portion of the phage population (~20%) had a 1845 bp deletion, a situation not seen in the Vendetta data. The deletion goes from positions 27142 to 28986 (inclusive) in the final sequence file. |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | CU |
| Subcluster | CU1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Number of Genes | 79 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KU998238 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
4 |
| Pitt Freezer Box Grid# |
E9 |
| Available Files |
| Final DNAMaster File | Download |