Streptomyces phage Spocter
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Detailed Information for Phage Spocter
Discovery Information
Isolation HostStreptomyces lividans JI 1326
Found ByOjas Somani & Emily Chiasson
Year Found2023
Location FoundSt. Louis, MO United States
Finding InstitutionWashington University in St. Louis
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates38.648611 N, 90.309722 W Map
Naming NotesHarvey Specter and Mike Ross from Suits
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 20, 2024
Sequencing FacilityThe McDonnell Genome Institute at Washington University
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage144
Genome length (bp)82736
Character of genome endsCircularly Permuted
GC Content66.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBQ
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members

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Annotating InstitutionWashington University in St. Louis
Annotation StatusIn GenBank
Number of Genes121
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Spocter_1
(helix-turn-helix DNA binding protein)

Spocter_2
(terminase)

Spocter_3
(portal protein)

Spocter_4
(minor capsid protein)

Spocter_5

Spocter_6
(scaffolding protein)

Spocter_7
(major capsid protein)

Spocter_8

Spocter_9

Spocter_10
(methyltransferase)

Spocter_11

Spocter_12

Spocter_13

Spocter_14
(head-to-tail adaptor)

Spocter_15
(head-to-tail stopper)

Spocter_16

Spocter_17
(tail terminator)

Spocter_18
(major tail protein)

Spocter_19
(tail assembly chaperone)

Spocter_20
(tail assembly chaperone)

Spocter_21
(tape measure protein)

Spocter_22
(minor tail protein)

Spocter_23

Spocter_24

Spocter_25
(minor tail protein)

Spocter_26

Spocter_27

Spocter_28

Spocter_29

Spocter_30
(endolysin)

Spocter_31

Spocter_32
(helix-turn-helix DNA binding protein)

Spocter_33

Spocter_34

Spocter_35

Spocter_36
(HNH endonuclease)

Spocter_37

Spocter_38

Spocter_39

Spocter_40
(RecB-like exonuclease/helicase)

Spocter_41

Spocter_42 — tRNA
(tRNA-Glu(ctc))

Spocter_43
(tellurium resistance protein)

Spocter_44
(RecA-like DNA recombinase)

Spocter_45

Spocter_46
(DNA primase)

Spocter_47

Spocter_48

Spocter_49
(DNA helicase)

Spocter_50

Spocter_51

Spocter_52

Spocter_53

Spocter_54

Spocter_55
(DNA polymerase I)

Spocter_56

Spocter_57

Spocter_58

Spocter_59

Spocter_60

Spocter_61

Spocter_62

Spocter_63
(peptidase)

Spocter_64

Spocter_65

Spocter_66
(PurA-like adenylosuccinate synthetase)

Spocter_67

Spocter_68
(deoxyuridine triphosphatase)

Spocter_69

Spocter_70

Spocter_71

Spocter_72

Spocter_73

Spocter_74

Spocter_75
(PurB-like adenylosuccinate lyase)

Spocter_76

Spocter_77

Spocter_78

Spocter_79

Spocter_80

Spocter_81

Spocter_82

Spocter_83

Spocter_84

Spocter_85

Spocter_86

Spocter_87

Spocter_88

Spocter_89

Spocter_90

Spocter_91

Spocter_92

Spocter_93

Spocter_94

Spocter_95

Spocter_96

Spocter_97

Spocter_98

Spocter_99
(FtsK-like DNA translocase)

Spocter_100

Spocter_101

Spocter_102

Spocter_103

Spocter_104

Spocter_105

Spocter_106

Spocter_107

Spocter_108

Spocter_109

Spocter_110

Spocter_111

Spocter_112

Spocter_113

Spocter_114

Spocter_115

Spocter_116

Spocter_117

Spocter_118

Spocter_119

Spocter_120

Spocter_121

Spocter_122

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPQ114745
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
SEA Lysate Titer 1.77*10^10
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload