Curtobacterium phage Transit
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| Detailed Information for Phage Transit | |
| Discovery Information | |
| Isolation Host | Curtobacterium flaccumfaciens NRRL B-729 SEA |
| Found By | Noelle McDonald |
| Year Found | 2024 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Phage Hunters Integrating Research and Education |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.439993 N, 79.910349 W Map |
| Discovery Notes | Isolated from dried grass. Plaque picture is after two day incubation. Annotated by Megan Magee. |
| Naming Notes | Named in honor of Pittsburgh's public transportation system, Pittsburgh Regional Transit |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Sep 16, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 1603 |
| Genome length (bp) | 18926 |
| Character of genome ends | Covalent Terminal Protein |
| GC Content | 52.2% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | JC |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members | |
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | Turbid haloed plaques |
| Number of Genes | 22 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewTransit_1 Transit_2 Transit_3 Transit_4 Transit_5 Transit_6 Transit_7 Transit_8 Transit_9 Transit_10 Transit_11 Transit_12 Transit_13 Transit_14 Transit_15 Transit_16 Transit_17 Transit_18 Transit_19 Transit_20 Transit_21 Transit_22 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PQ868977 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Not in Pitt Archives |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| GenBank File for Phamerator | Download |