| Detailed Information for Phage Trina |
| Discovery Information |
| Isolation Host | Rhodococcus erythropolis RIA 643 |
| Found By | Jordan Wagner |
| Year Found | 2014 |
| Location Found | Benton, LA USA |
| Finding Institution | University of Louisiana at Monroe |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 32.704374 N, 93.759579 W Map |
| Discovery Notes | Soil sample was located along the edge of a homemade bird bath that used to be a plastic tub lid. Soil sample was in a shaded area and was located 3 inches underneath pine straw. The bird bath is in the backyard of my grand parents house. Soil sample was moist due to a recent rain shower. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 14, 2015 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 1312 |
| Genome length (bp) | 139262 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 2860 bp |
| GC Content | 44.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | CE |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Lysogeny Notes | Lysogenic. |
| Other Cluster Members |
|
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques appeared after 48 hours; numerous, small "pin pricks." Clear plaques. |
| Number of Genes | 252 |
| Number of tRNAs | 33 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MF668286 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
35 |
| Pitt Freezer Box Grid# |
D12 |
| Available Files |
| Plaque Picture | Download |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |
