Detailed Information for Phage Triscuit |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Gabrielle Gentile |
Year Found | 2016 |
Location Found | Saint Clairsville, OH USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 40.082364 N, 80.920625 W Map |
Discovery Notes | This sample was found in my backyard about a foot below the surface. The soil was dense and light tan in color. The weather was sunny, clear skies, and 76 degrees Fahrenheit. I collected my sample on 5/8/16 at around 2:30. |
Naming Notes | This phage is named after the cracker. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Sep 15, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 2075 |
Genome length (bp) | 67539 |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 3795 bp |
GC Content | 58.3% |
Sequencing Notes | Ends were determined by running Pause created by Texas A & M University, Center for Phage Technology |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | GG |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members |
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Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Plaque Notes | Triscuit forms clear plaques that are <1mm in size. |
Morphotype | Siphoviridae |
Number of Genes | 112 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH047631 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
5 |
Pitt Freezer Box Grid# |
F4 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |