| Detailed Information for Phage Wilde | |
| Discovery Information | |
| Isolation Host | Arthrobacter sp. ATCC 21022 |
| Former names | MTC14 |
| Found By | Julia Cautela |
| Year Found | 2014 |
| Location Found | Montclair, NJ USA |
| Finding Institution | Saint Joseph's University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 40.811668 N, 74.220925 W Map |
| Discovery Notes | Collected on August 22 2014 at 7:55 pm. 21 degrees Celsius, 73% humidity. Soil sample was moist and collected from a backyard with a downhill slope near a fence. |
| Naming Notes | "Wilde" is the name of the street from which the soil sample was gathered. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 26, 2015 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 1528 |
| Genome length (bp) | 68203 |
| Character of genome ends | Direct Terminal Repeat |
| GC Content | 62.9% |
| Sequencing Notes | This genome has one clear end (right) and one ambiguous end, but it appears that there's a terminal repeat. The best guess of ~589 bp terminal repeat was used. |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | AP |
| Subcluster | AP1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to ViewRanunculus (None) Rizwana (AP1) Tank (AP1) Wilde (AP1) Beagle (AP2) BetaFish (AP2) DogYard (AP2) Forrestell (AP2) Kubulix (AP2) MellowYellow (AP2) Nikan (AP2) NyleyClemson (AP2) Odyssey395 (AP2) Ollypop (AP2) PhuzzTulsa (AP2) Pointis (AP2) Pureglobe5 (AP2) RazzB (AP2) Ren19 (AP2) BruhMoment (AP3) AWGoat (AP4) SilentRX (AP4) |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | Clear plaques, about 0.4 mm in diameter. Capsid diameter was 72.5 +/- 3 nm. Tail diameter was 270.1 +/- 16 nm. 13 phages were measured. |
| Morphotype | Siphoviridae |
| Number of Genes | 109 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewWilde_1 Wilde_2 Wilde_3 Wilde_4 Wilde_5 Wilde_6 Wilde_7 Wilde_8 Wilde_9 Wilde_10 Wilde_11 Wilde_12 Wilde_13 Wilde_14 Wilde_15 Wilde_16 Wilde_17 Wilde_18 Wilde_19 Wilde_20 Wilde_21 Wilde_22 Wilde_23 Wilde_24 Wilde_25 Wilde_26 Wilde_27 Wilde_28 Wilde_29 Wilde_30 Wilde_31 Wilde_32 Wilde_33 Wilde_34 Wilde_35 Wilde_36 Wilde_37 Wilde_38 Wilde_39 Wilde_40 Wilde_41 Wilde_42 Wilde_43 Wilde_44 Wilde_45 Wilde_46 Wilde_47 Wilde_48 Wilde_49 Wilde_50 Wilde_51 Wilde_52 Wilde_53 Wilde_54 Wilde_55 Wilde_56 Wilde_57 Wilde_58 Wilde_59 Wilde_60 Wilde_61 Wilde_62 Wilde_63 Wilde_64 Wilde_65 Wilde_66 Wilde_67 Wilde_68 Wilde_69 Wilde_70 Wilde_71 Wilde_72 Wilde_73 Wilde_74 Wilde_75 Wilde_76 Wilde_77 Wilde_78 Wilde_79 Wilde_80 Wilde_81 Wilde_82 Wilde_83 Wilde_84 Wilde_85 Wilde_86 Wilde_87 Wilde_88 Wilde_89 Wilde_90 Wilde_91 Wilde_92 Wilde_93 Wilde_94 Wilde_95 Wilde_96 Wilde_97 Wilde_98 Wilde_99 Wilde_100 Wilde_101 Wilde_102 Wilde_103 Wilde_104 Wilde_105 Wilde_106 Wilde_107 Wilde_108 Wilde_109 |
| Submitted Annotation in DNA Master Format | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KU160673 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 148 |
| Pitt Freezer Box Grid# | C9 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| Final DNAMaster File | Download |