| Detailed Information for Phage Xula | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Deborah Jacobs-Sera |
| Year Found | 2018 |
| Location Found | Durban, South Africa |
| Finding Institution | University of Pittsburgh |
| Program | Phage Hunters Integrating Research and Education |
| From enriched soil sample? | Unknown |
| Isolation Temperature | Not entered |
| GPS Coordinates | 29.853037 S, 31.029283 E Map |
| Naming Notes | Named for one of the 2 fine dogs at St. Annes Guest House, Durban S. Africa. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 16, 2019 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 2031 |
| Genome length (bp) | 48540 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | CCCACCCCTCA |
| GC Content | 66.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | I |
| Subcluster | I1 |
| Cluster Life Cycle | Temperate |
| Lysogeny Notes | Colonies formed in clearing from spotted lysate. |
| Other Cluster Members | |
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Morphotype | Siphoviridae |
| Number of Genes | 74 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewXula_1 Xula_2 Xula_3 Xula_4 Xula_5 Xula_6 Xula_7 Xula_8 Xula_9 Xula_10 Xula_11 Xula_12 Xula_13 Xula_14 Xula_15 Xula_16 Xula_17 Xula_18 Xula_19 Xula_20 Xula_21 Xula_22 Xula_23 Xula_24 Xula_25 Xula_26 Xula_27 Xula_28 Xula_29 Xula_30 Xula_31 Xula_32 Xula_33 Xula_34 Xula_35 Xula_36 Xula_37 Xula_38 Xula_39 Xula_40 Xula_41 Xula_42 Xula_43 Xula_44 Xula_45 Xula_46 Xula_47 Xula_48 Xula_49 Xula_50 Xula_51 Xula_52 Xula_53 Xula_54 Xula_55 Xula_56 Xula_57 Xula_58 Xula_59 Xula_60 Xula_61 Xula_62 Xula_63 Xula_64 Xula_65 Xula_66 Xula_67 Xula_68 Xula_69 Xula_70 Xula_71 Xula_72 Xula_73 Xula_74 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MN234195 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 96 |
| Pitt Freezer Box Grid# | A11 |
| Available Files | |
| Plaque Picture | Download |
| EM Picture | Download |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |