Detailed Information for Phage Yvonnetastic |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Yvonne Pham |
Year Found | 2015 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 40.44 N, 79.96 W Map |
Naming Notes | I couldn't use my last name in the phage name because it has been co-opted by scientists! |
Mutants |
Mutants of this Phage |
Click to View
MM700
MM701
MM702
MM703
MM704
|
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 4, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 641 |
Genome length (bp) | 98136 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGCGAAGCTC |
GC Content | 59.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DD |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Number of Genes | 198 |
Number of tRNAs | 5 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | KU963248 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
6.53 x 10^9 |
Date of SEA Lysate Titering |
Nov 3, 2015 |
Pitt Freezer Box# |
3 |
Pitt Freezer Box Grid# |
B2 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |