Detailed Information for Phage Zooman |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Emily Haviland |
Year Found | 2020 |
Location Found | Storrs, CT United States |
Finding Institution | University of Connecticut |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 41.819 N, 72.25 W Map |
Discovery Notes | I chose soil from The University of Connecticut, Storrs, and the soil I found was taken from the ground near a horse pen. |
Naming Notes | I choose the name "Zooman" because being in a lab setting reminded me of my favorite childhood movie "Zoom: Academy for Superheros" and I included "man" at the end because I wanted to humanize my bacteriophage more because after spending so much time with it over these past few months, I felt as though I had made a connection with it. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 21, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 70 |
Genome length (bp) | 192730 |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 17077 bp |
GC Content | 58.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | GD |
Subcluster | GD2 |
Cluster Life Cycle | Unknown |
Other Cluster Members |
|
Annotating Institution | University of Connecticut |
Annotation Status | In GenBank |
Plaque Notes | My plaque is clear and small! |
Morphotype | Siphoviridae |
Number of Genes | 311 |
Number of tRNAs | 42 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OK040793 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
162 |
Pitt Freezer Box Grid# |
C11 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |