Mycobacterium phage Gattaca
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Detailed Information for Phage Gattaca
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByDylan Katon & Jordan Drouin
Year Found2014
Location FoundMachias, ME United States
Finding InstitutionUniversity of Maine, Machias
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates44.555822 N, 67.863971 W Map
Discovery NotesFound in a soil sample from Milbridge, ME. Soil collected from salty dog farm. Soil was collected from the remnants of a compost pile from 2013. The top layer of the compost was removed to expose the wet compost underneath. The sample was taken from this pile which had a dark brown color and an even consistency of fine soil.
Naming NotesPhage named after the movie Gattaca. Plot of movie was about having perfect DNA and thus being listed as "valid".
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 18, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1647
Genome length (bp)65237
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceGCGCGCAGCGC
GC Content63.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterS
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusIn GenBank
Plaque NotesPhage created small 1mm plaques. Plaques were clear.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Gattaca_1

Gattaca_2

Gattaca_3

Gattaca_4

Gattaca_5

Gattaca_6

Gattaca_7

Gattaca_8

Gattaca_9

Gattaca_10

Gattaca_11

Gattaca_12

Gattaca_13

Gattaca_14

Gattaca_15

Gattaca_16

Gattaca_17

Gattaca_18

Gattaca_19

Gattaca_20

Gattaca_21

Gattaca_22

Gattaca_23
(helix-turn-helix protein)

Gattaca_24

Gattaca_25

Gattaca_26

Gattaca_27

Gattaca_28

Gattaca_29

Gattaca_30

Gattaca_31
(DNA methylase)

Gattaca_32

Gattaca_33

Gattaca_34
(terminase)

Gattaca_35
(portal protein)

Gattaca_36
(caspsid maturation protease)

Gattaca_37
(scaffolding protein)

Gattaca_38

Gattaca_39
(major capsid protein)

Gattaca_40

Gattaca_41

Gattaca_42

Gattaca_43

Gattaca_44
(major tail subunit)

Gattaca_45
(tail assembly chaperone)

Gattaca_46
(tail assembly chaperone)

Gattaca_47
(tape measure protein)

Gattaca_48
(minor tail protein)

Gattaca_49
(minor tail protein)

Gattaca_50
(HNH endonuclease)

Gattaca_51

Gattaca_52

Gattaca_53
(lysin A)

Gattaca_54
(holin)

Gattaca_55
(lysin B)

Gattaca_56
(holin)

Gattaca_57

Gattaca_58

Gattaca_59

Gattaca_60

Gattaca_61

Gattaca_62

Gattaca_63

Gattaca_64
(exonuclease)

Gattaca_65

Gattaca_66

Gattaca_67
(HNH endonuclease)

Gattaca_68
(hydrolase)

Gattaca_69

Gattaca_70

Gattaca_71

Gattaca_72

Gattaca_73

Gattaca_74

Gattaca_75

Gattaca_76

Gattaca_77

Gattaca_78

Gattaca_79

Gattaca_80

Gattaca_81

Gattaca_82

Gattaca_83
(methyltransferase)

Gattaca_84
(galactosyltransferase)

Gattaca_85

Gattaca_86
(glycosyltransferase)

Gattaca_87

Gattaca_88

Gattaca_89

Gattaca_90

Gattaca_91
(HNH endonuclease)

Gattaca_92

Gattaca_93

Gattaca_94

Gattaca_95

Gattaca_96

Gattaca_97

Gattaca_98

Gattaca_99

Gattaca_100

Gattaca_101

Gattaca_102

Gattaca_103

Gattaca_104

Gattaca_105

Gattaca_106

Gattaca_107

Gattaca_108

Gattaca_109

Gattaca_110

Gattaca_111

Gattaca_112

Gattaca_113

Gattaca_114

Gattaca_115

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKX159477
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 12
Pitt Freezer Box Grid# F5
Available Files
Restriction Digest PictureDownload
EM PictureDownload