Gordonia phage Pollux
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Detailed Information for Phage Pollux
Discovery Information
Isolation HostGordonia terrae CAG3
Found ByBailey Edmonds
Year Found2017
Location FoundLawrence, KS USA
Finding InstitutionUniversity of Kansas
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates38.926389 N, 95.254444 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 9, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage3418
Genome length (bp)52488
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGTATGGCAT
GC Content66.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCY
SubclusterCY1
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusQC Complete
Plaque NotesClear, small plaques
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Pollux_1
(terminase, small subunit)

Pollux_2
(terminase, large subunit)

Pollux_3
(portal protein)

Pollux_4
(capsid maturation protease)

Pollux_5
(scaffolding protein)

Pollux_6
(capsid decoration protein)

Pollux_7
(major capsid protein)

Pollux_8

Pollux_9
(head-to-tail connector complex protein)

Pollux_10
(head-to-tail connector complex protein)

Pollux_11

Pollux_12

Pollux_13
(head-to-tail connector complex protein)

Pollux_14
(major tail protein)

Pollux_15
(tail assembly chaperone)

Pollux_16
(tail assembly chaperone)

Pollux_17

Pollux_18
(tape measure protein)

Pollux_19
(minor tail protein)

Pollux_20
(minor tail protein)

Pollux_21

Pollux_22
(lysin A)

Pollux_23
(holin)

Pollux_24

Pollux_25

Pollux_26
(membrane protein)

Pollux_27
(lysin B)

Pollux_28

Pollux_29
(minor tail protein)

Pollux_30

Pollux_31

Pollux_32

Pollux_33

Pollux_34

Pollux_35

Pollux_36
(helix-turn-helix DNA binding domain)

Pollux_37
(integrase, (Y-int))

Pollux_38
(integrase, (Y-int))

Pollux_39
(helix-turn-helix DNA binding domain)

Pollux_40
(peptidase)

Pollux_41

Pollux_42
(helix-turn-helix DNA binding domain)

Pollux_43

Pollux_44
(immunity repressor)

Pollux_45
(helix-turn-helix DNA binding domain)

Pollux_46

Pollux_47

Pollux_48

Pollux_49

Pollux_50

Pollux_51

Pollux_52

Pollux_53

Pollux_54

Pollux_55

Pollux_56

Pollux_57
(DnaQ-like exonuclease (DNA polymerase III subunit))

Pollux_58

Pollux_59
(RecE-like exonuclease)

Pollux_60
(ssDNA binding protein)

Pollux_61

Pollux_62

Pollux_63

Pollux_64

Pollux_65

Pollux_66
(HNH endonuclease)

Pollux_67
(DNA methylase)

Pollux_68

Pollux_69

Pollux_70

Pollux_71

Pollux_72

Pollux_73

Pollux_74

Pollux_75

Pollux_76
(RusA-like resolvase (endonuclease))

Pollux_77

Pollux_78

Pollux_79

Pollux_80
(HTH DNA binding protein, MerR-like)

Pollux_81

Pollux_82
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 66
Pitt Freezer Box Grid# H5
Available Files
EM PictureDownload
GenBank File for PhameratorDownload