| Detailed Information for Phage Upyo |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Patrick Fleming, Hannah Kline |
| Year Found | 2019 |
| Location Found | Orono, ME United States |
| Finding Institution | University of Maine, Honors College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | Not entered |
| GPS Coordinates | 44.904992 N, 68.664329 W Map |
| Naming Notes | Two lab partners studying in the University of Maine would like to show to the science community, what is "Upyo"? |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 22, 2020 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 155 |
| Genome length (bp) | 45732 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | TTCCGCCGGTA |
| GC Content | 67.9% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | CD |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Maine, Honors College |
| Annotation Status | In GenBank |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MT521997 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
109 |
| Pitt Freezer Box Grid# |
G10 |
| Available Files |
| EM Picture | Download |
| GenBank File for Phamerator | Download |