Arthrobacter phage AdaS
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Detailed Information for Phage AdaS
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByXiuyu Shi
Year Found2024
Location FoundWest Lafayette, IN United States
Finding InstitutionPurdue University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature28°C
GPS Coordinates40.42253 N, 86.91456 W Map
Discovery NotesThis phage was discovered in a soil sample collected mid-day in the late summer (September 5th), The soil it was collected in was very moist with little to no nearby vegetation. Furthermore, the sample was collected 3 cm under the surface of the Earth.
Naming NotesNamed after an Adornment known as Ada
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 8, 2025
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina NextSeq 1000
Read TypeSingle-end reads
Read Length100 bp
Approximate Shotgun Coverage3715
Genome length (bp)50713
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCCGGTGA
GC Content62.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAY
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionPurdue University
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes92
Number of tRNAs2
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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AdaS_1
(terminase, small subunit)

AdaS_2
(terminase, large subunit (ATPase domain))

AdaS_3
(terminase, large subunit (nuclease domain))

AdaS_4
(portal protein)

AdaS_5
(capsid maturation protease)

AdaS_6
(scaffolding protein)

AdaS_7
(capsid decoration protein, LamD-like)

AdaS_8
(major capsid protein)

AdaS_9

AdaS_10
(head-to-tail adaptor)

AdaS_11
(head-to-tail stopper)

AdaS_12

AdaS_13
(tail terminator)

AdaS_14

AdaS_15
(major tail protein)

AdaS_16
(tail assembly chaperone)

AdaS_17
(tail assembly chaperone)

AdaS_18

AdaS_19
(tape measure protein)

AdaS_20
(minor tail protein)

AdaS_21
(minor tail protein)

AdaS_22
(minor tail protein)

AdaS_23
(minor tail protein)

AdaS_24

AdaS_25

AdaS_26

AdaS_27
(endolysin, protease M23 domain)

AdaS_28

AdaS_29

AdaS_30
(tail collar fiber)

AdaS_31

AdaS_32
(HNH endonuclease)

AdaS_33

AdaS_34
(helix-turn-helix DNA binding domain)

AdaS_35
(tyrosine integrase)

AdaS_36

AdaS_37

AdaS_38

AdaS_39

AdaS_40

AdaS_41

AdaS_42

AdaS_43

AdaS_44

AdaS_45
(helix-turn-helix DNA binding domain)

AdaS_46
(DNA binding protein)

AdaS_47
(IrrE-like protein)

AdaS_48
(helix-turn-helix DNA binding domain)

AdaS_49
(helix-turn-helix DNA binding domain)

AdaS_50
(helix-turn-helix DNA binding protein)

AdaS_51

AdaS_52
(helix-turn-helix DNA binding domain)

AdaS_53

AdaS_54

AdaS_55

AdaS_56

AdaS_57

AdaS_58

AdaS_59

AdaS_60
(helix-turn-helix DNA binding domain)

AdaS_61

AdaS_62

AdaS_63

AdaS_64
(exonuclease)

AdaS_65
(chaperonin, DnaJ-like)

AdaS_66

AdaS_67

AdaS_68
(HNH endonuclease)

AdaS_69
(SSB protein)

AdaS_70
(NrdH-like glutaredoxin)

AdaS_71
(DNA helicase/methylase)

AdaS_72
(helix-turn-helix DNA binding domain)

AdaS_73
(DNA polymerase III sliding clamp (Beta))

AdaS_74
(DNA methyltransferase)

AdaS_75
(endonuclease VII)

AdaS_76
(DNA binding protein)

AdaS_77

AdaS_78

AdaS_79

AdaS_80
(MazG-like nucleotide pyrophosphohydrolase)

AdaS_81
(RusA-like resolvase)

AdaS_82

AdaS_83

AdaS_84

AdaS_85

AdaS_86

AdaS_87
(helix-turn-helix DNA binding domain)

AdaS_88
(HNH endonuclease)

AdaS_89 — tRNA
(tRNA-?(Ala|Cys)(agca))

AdaS_90 — tRNA
(tRNA-Trp(cca))

AdaS_91

AdaS_92

AdaS_93
(metalloprotease)

AdaS_94
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPV876959
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 213
Pitt Freezer Box Grid# A9
Available Files
GenBank File for PhameratorDownload