Streptomyces phage Alone3
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Detailed Information for Phage Alone3
Discovery Information
Isolation HostStreptomyces lividans JI 1326
Found ByPrincess Fayemi and Chethan Chandra
Year Found2022
Location FoundSaint Louis, MO USA
Finding InstitutionWashington University in St. Louis
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation Temperature13°C
GPS Coordinates38.645378 N, 90.31408 W Map
Discovery NotesThe soil was collected near grass, and it was taken from a depth of 2 inches.

The electron micrograph is labeled as if it contains the phage "Cursive," but this is due to a file sorting error. The micrograph contains Alone3
Naming NotesThis phage was named "Alone 3" because it was the third soil sample, and we collected it far away from the group we were sampling with.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 21, 2023
Sequencing FacilityThe McDonnell Genome Institute at Washington University
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage161
Genome length (bp)115924
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length197 bp
GC Content53.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBS
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members

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Annotating InstitutionWashington University in St. Louis
Annotation StatusIn GenBank
Number of Genes191
Number of tRNAs30
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Alone3_1

Alone3_2

Alone3_3
(HNH endonuclease)

Alone3_4

Alone3_5

Alone3_6

Alone3_7

Alone3_8
(ribbon-helix-helix DNA binding domain protein)

Alone3_9

Alone3_10

Alone3_11

Alone3_12

Alone3_13

Alone3_14

Alone3_15 — tRNA
(tRNA-Pro(tgg))

Alone3_16 — tRNA
(tRNA-Phe(gaa))

Alone3_17 — tRNA
(tRNA-Met(cat))

Alone3_18 — tRNA
(tRNA-Met(cat))

Alone3_19 — tRNA
(tRNA-Gly(tcc))

Alone3_20 — tRNA
(tRNA-Gln(ctg))

Alone3_21 — tRNA
(tRNA-Gln(ttg))

Alone3_22

Alone3_23 — tRNA
(tRNA-Asp(gtc))

Alone3_24 — tRNA
(tRNA-Glu(ctc))

Alone3_25 — tRNA
(tRNA-Glu(ttc))

Alone3_26

Alone3_27

Alone3_28 — tRNA
(tRNA-Thr(tgt))

Alone3_29 — tRNA
(tRNA-Thr(cgt))

Alone3_30 — tRNA
(tRNA-Thr(ggt))

Alone3_31 — tRNA
(tRNA-Leu(caa))

Alone3_32 — tRNA
(tRNA-Leu(tag))

Alone3_33

Alone3_34 — tRNA
(tRNA-Trp(cca))

Alone3_35 — tRNA
(tRNA-Asn(gtt))

Alone3_36 — tRNA
(tRNA-Ser(gct))

Alone3_37
(Ro-like RNA binding protein)

Alone3_38 — tRNA
(tRNA-Ala(tgc))

Alone3_39 — tRNA
(tRNA-Lys(ctt))

Alone3_40 — tRNA
(tRNA-Lys(ttt))

Alone3_41

Alone3_42
(peptidase)

Alone3_43
(tellurium resistance protein D family)

Alone3_44 — tRNA
(tRNA-Arg(acg))

Alone3_45

Alone3_46 — tRNA
(tRNA-Arg(tct))

Alone3_47

Alone3_48

Alone3_49

Alone3_50

Alone3_51 — tRNA
(tRNA-Val(tac))

Alone3_52 — tRNA
(tRNA-Ser(gct))

Alone3_53 — tRNA
(tRNA-Ser(gga))

Alone3_54 — tRNA
(tRNA-Ser(tga))

Alone3_55 — tRNA
(tRNA-Ile(gat))

Alone3_56
(thioredoxin)

Alone3_57 — tRNA
(tRNA-His(gtg))

Alone3_58

Alone3_59 — tRNA
(tRNA-Tyr(gta))

Alone3_60

Alone3_61
(RNA ligase)

Alone3_62

Alone3_63
(HNH endonuclease)

Alone3_64
(phosphoesterase)

Alone3_65
(endonuclease VII)

Alone3_66
(MazG-like nucleotide pyrophosphohydrolase)

Alone3_67

Alone3_68

Alone3_69

Alone3_70

Alone3_71
(terminase)

Alone3_72

Alone3_73
(endonuclease VII)

Alone3_74

Alone3_75

Alone3_76

Alone3_77

Alone3_78
(portal protein)

Alone3_79
(scaffolding protein)

Alone3_80
(major capsid protein)

Alone3_81

Alone3_82

Alone3_83

Alone3_84

Alone3_85

Alone3_86
(tailspike protein)

Alone3_87

Alone3_88

Alone3_89
(minor tail protein)

Alone3_90
(tail sheath protein)

Alone3_91
(tail tube protein)

Alone3_92

Alone3_93

Alone3_94

Alone3_95
(minor tail protein)

Alone3_96

Alone3_97
(minor tail protein)

Alone3_98
(minor tail protein)

Alone3_99
(baseplate wedge protein)

Alone3_100
(baseplate J protein)

Alone3_101

Alone3_102
(minor tail protein)

Alone3_103
(minor tail protein)

Alone3_104

Alone3_105

Alone3_106

Alone3_107

Alone3_108

Alone3_109

Alone3_110

Alone3_111

Alone3_112
(DnaC-like helicase loader)

Alone3_113

Alone3_114

Alone3_115

Alone3_116

Alone3_117
(endonuclease VII)

Alone3_118
(nucleotidyl transferase)

Alone3_119

Alone3_120
(polynucleotide kinase)

Alone3_121

Alone3_122

Alone3_123

Alone3_124

Alone3_125

Alone3_126
(DnaB-like dsDNA helicase)

Alone3_127
(DNA primase)

Alone3_128
(DNA helicase)

Alone3_129
(host nuclease inhibitor)

Alone3_130

Alone3_131

Alone3_132

Alone3_133

Alone3_134

Alone3_135

Alone3_136

Alone3_137

Alone3_138

Alone3_139

Alone3_140

Alone3_141

Alone3_142
(SSB protein)

Alone3_143
(DNA polymerase I)

Alone3_144

Alone3_145

Alone3_146
(ribonucleotide reductase)

Alone3_147

Alone3_148
(RecA-like DNA recombinase)

Alone3_149

Alone3_150

Alone3_151

Alone3_152
(RNA ligase)

Alone3_153

Alone3_154

Alone3_155

Alone3_156

Alone3_157

Alone3_158

Alone3_159
(Holliday junction resolvase)

Alone3_160
(WhiB family transcription factor)

Alone3_161
(Cas4 exonuclease)

Alone3_162
(SSB protein)

Alone3_163

Alone3_164
(ThyX-like thymidylate synthase)

Alone3_165

Alone3_166

Alone3_167

Alone3_168

Alone3_169

Alone3_170

Alone3_171

Alone3_172
(DprA-like DNA processing chain A)

Alone3_173

Alone3_174

Alone3_175
(RuvC-like resolvase)

Alone3_176

Alone3_177

Alone3_178

Alone3_179

Alone3_180

Alone3_181

Alone3_182

Alone3_183
(peptidase)

Alone3_184

Alone3_185

Alone3_186

Alone3_187
(endolysin)

Alone3_188
(HNH endonuclease)

Alone3_189

Alone3_190
(phosphatase)

Alone3_191

Alone3_192

Alone3_193

Alone3_194

Alone3_195

Alone3_196

Alone3_197

Alone3_198

Alone3_199

Alone3_200

Alone3_201
(ArdA-like antirestriction protein)

Alone3_202

Alone3_203

Alone3_204

Alone3_205

Alone3_206

Alone3_207

Alone3_208

Alone3_209

Alone3_210

Alone3_211

Alone3_212

Alone3_213

Alone3_214

Alone3_215

Alone3_216
(endonuclease VII)

Alone3_217

Alone3_218

Alone3_219

Alone3_220

Alone3_221

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOR725492
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload