Arthrobacter phage Altadena
Altadena Plaque Picture
Altadena EM Picture
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Altadena
Discovery Information
Isolation HostArthrobacter globiformis NRRL B-2880
Found ByDavian Clifton
Year Found2022
Location FoundPetersburg, VA United States
Finding InstitutionVirginia State University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates37.241737 N, 77.417775 W Map
Discovery NotesFound in soil planted under a tree. The soil was dry dark and chunky with lots of debris like sticks in it. The tree is located in front of the Gateway Residence Hall on campus.
Naming NotesAltadena is the final song on the album "Take Me Apart" by the artist Kelela. Not only was I really drawn to the name but the song is one of my favorites from that album.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 4, 2023
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage3003
Genome length (bp)48060
Character of genome endsCircularly Permuted
GC Content70.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterFH
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionVirginia State University
Annotation StatusIn GenBank
Plaque NotesThe plaques are about 0.2 cm in length and usually cluster together. The middle is clear with a halo-like ring around it.
Number of Genes76
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Altadena_1
(terminase small subunit)

Altadena_2
(terminase large subunit)

Altadena_3
(portal protein)

Altadena_4
(capsid maturation protease)

Altadena_5

Altadena_6
(scaffolding protein)

Altadena_7
(capsid decoration protein)

Altadena_8
(major capsid protein)

Altadena_9

Altadena_10

Altadena_11

Altadena_12

Altadena_13

Altadena_14
(tail sheath protein)

Altadena_15
(tail tube protein)

Altadena_16
(tail assembly chaperone)

Altadena_17

Altadena_18
(tape measure protein)

Altadena_19
(LysM-like peptidoglycan binding protein)

Altadena_20
(minor tail protein)

Altadena_21

Altadena_22
(minor tail protein)

Altadena_23
(minor tail protein)

Altadena_24

Altadena_25

Altadena_26

Altadena_27
(endolysin)

Altadena_28

Altadena_29

Altadena_30
(baseplate wedge protein)

Altadena_31
(baseplate J protein)

Altadena_32

Altadena_33

Altadena_34

Altadena_35

Altadena_36
(Cas4 exonuclease)

Altadena_37

Altadena_38
(helix-turn-helix DNA binding domain protein)

Altadena_39

Altadena_40
(SSB protein)

Altadena_41
(helix-turn-helix DNA binding domain protein)

Altadena_42

Altadena_43

Altadena_44

Altadena_45

Altadena_46

Altadena_47
(RusA-like resolvase)

Altadena_48

Altadena_49

Altadena_50
(helix-turn-helix DNA binding domain protein)

Altadena_51

Altadena_52

Altadena_53

Altadena_54

Altadena_55

Altadena_56

Altadena_57

Altadena_58
(nuclease)

Altadena_59

Altadena_60
(ParB-like nuclease domain protein)

Altadena_61

Altadena_62
(Tet-like J-binding protein)

Altadena_63
(glycosyltransferase)

Altadena_64
(glucosaminyl deacetylase)

Altadena_65

Altadena_66

Altadena_67

Altadena_68
(helix-turn-helix DNA binding domain protein)

Altadena_69

Altadena_70

Altadena_71

Altadena_72

Altadena_73

Altadena_74

Altadena_75

Altadena_76

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOR521058
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 166
Pitt Freezer Box Grid# B2
Available Files
GenBank File for PhameratorDownload