| Detailed Information for Phage ApoKipo |
| Discovery Information |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | McKinzie Novak |
| Year Found | 2024 |
| Location Found | Tickfaw, LA United States |
| Finding Institution | Southeastern Louisiana University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 30.538618 N, 90.57431 W Map |
| Discovery Notes | Discovered in a garden with very dry soil that had been untouched and undisturbed for a long period of time. |
| Naming Notes | The naming for this virus comes from the greek terminology "from garden" because that is what it had originated from. Sort of an acknowledgement to the place it was found. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 27, 2025 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 100 bp |
| Approximate Shotgun Coverage | 1435 |
| Genome length (bp) | 60990 |
| Character of genome ends | Circularly Permuted |
| GC Content | 67.4% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | AL |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Southeastern Louisiana University |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques are extremely tiny and do not grow much but still maintain a circular shape with very clear distinct edges. |
| Number of Genes | 102 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PX234437 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Not in Pitt Archives |
| Available Files |
| GenBank File for Phamerator | Download |